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Q083E0 (Q083E0_SHEFN) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glucan 1,4-alpha-glucosidase EMBL ABI71625.1
EC=3.2.1.3 EMBL ABI71625.1
Gene names
Ordered Locus Names:Sfri_1775
OrganismShewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI71625.1
Taxonomic identifier318167 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length820 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL ABI71625.1
Chain36 – 820785 Potential EMBL ABI71625.1
PRO_5000130733

Sequences

Sequence LengthMass (Da)Tools
Q083E0 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 83FB9FED30D5DAAA

FASTA82089,572
        10         20         30         40         50         60 
MLKPHLLTHR SIIAKAVTTS MMALALSACS PADTQVNTQA QVVNVAPGTP GTEPTWAFSG 

        70         80         90        100        110        120 
KTGIGTSYEP YVNGNYQDTA ANPVSKVWFS IAQGVLTETM FGLIHNAQLK ELQFIISGKG 

       130        140        150        160        170        180 
FVDTEKSNTI STIEYLDTDD MGRPLSLAYK VINKDVEGKY QIEKHIFTDP DRNSLMMKVT 

       190        200        210        220        230        240 
FTAFEAGITP HLYVNPHIDN SGANDIASVE GQSLVAYTSD TNSTVMTVKT DVDFVAASAG 

       250        260        270        280        290        300 
FVGTSDGIVD LQDNGKLDYH YQTTSDTNQG GNVALTAQYP TLANVNDSLS FNLVIGFGKD 

       310        320        330        340        350        360 
KASSLATTQA TLDAGYDAVK QAYLGDDKHL GWKDYLASLK PLNDMSSNTT DNGKLLYASA 

       370        380        390        400        410        420 
LVLKAQEDKT HAGALIASLS NPWGDTVSAK VGSTGYKAVW PRDFYQCAMA FLAMGDTQTP 

       430        440        450        460        470        480 
KVAFEYLKQV QVQQQTPGFA GTPGWFLQKT HVDGEIEWVG VQLDQTAMPI MLGWKLWQAG 

       490        500        510        520        530        540 
VLNNTEITQW YNDMLKPAAN FLVKGGNVKL DWNDTKITPP STQQERWEEQ AGFSPSTTAA 

       550        560        570        580        590        600 
VIAGLVAASD IGALAKDEQA PEYADLARKL QRQLETTMAT TTGLLGQTDS KGKVAPYYVR 

       610        620        630        640        650        660 
ISPNGNPNNT DKLIDNNGKP GLDQRLILDG GFLELVRYGV VNAKDPVIKN SVMLIDNQNL 

       670        680        690        700        710        720 
EDNLRVKYQF TAKDGSKVPG YRRYGNDGYG EDTVTGLSYA EKGDTENQRG RVWPFFTGER 

       730        740        750        760        770        780 
GHYELALAKA NDTLTPDTKK VLINTYVQGM ETFANQGLML PEQAWDGVGN ATRYNYKMGQ 

       790        800        810        820 
GTNTATPLAW THAEYVKLVR SMTDEKVWDF YPVVQQTLAK

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References

[1]"Complete sequence of Shewanella frigidimarina NCIMB 400."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. expand/collapse author list , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCIMB 400.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000447 Genomic DNA. Translation: ABI71625.1.
RefSeqYP_750463.1. NC_008345.1.

3D structure databases

ProteinModelPortalQ083E0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ083E0.

Protein family/group databases

CAZyGH15. Glycoside Hydrolase Family 15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4277554.
GenomeReviewsGene locus Sfri_1775 in contig CP000447_GR.
KEGGsfr:Sfri_1775.
NMPDRfig|318167.10.peg.1708.
PATRIC23497507. VBISheFri14343_1841.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3387.
HOGENOMHBG290978.
OMARWEENAG.
ProtClustDBCLSK890895.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR015220. Glucodextran_N.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011613. Glyco_hydro_15.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
KOK01178.
PfamPF09137. Glucodextran_N. 1 hit.
PF00723. Glyco_hydro_15. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ083E0_SHEFN
AccessionPrimary (citable) accession number: Q083E0
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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