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Q082H5 (Q082H5_SHEFN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Trimethylamine-N-oxide reductase TorA EMBL ABI71840.1
Gene names
Ordered Locus Names:Sfri_1994
OrganismShewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI71840.1
Taxonomic identifier318167 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length830 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL ABI71840.1
Chain33 – 830798 Potential EMBL ABI71840.1
PRO_5000130776

Sequences

Sequence LengthMass (Da)Tools
Q082H5 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 5729D526B8D593F5

FASTA83092,531
        10         20         30         40         50         60 
MNRRHFLKGL VATSYVGLSS TSVLAPFNAL AAAGTKANDD WLTTGSHFGA FKMKRKNGVI 

        70         80         90        100        110        120 
DQVIPFELDK YPTDMINGVK GLVYNPSRVR YPMVRLDFLL KGHKSDTSQR GDFRFVRVTW 

       130        140        150        160        170        180 
DKALTLFKDS LDEVQTQYGP SGLHAGQTGW RATGQLHSST SHMQRAVGMH GNFVKKIGDY 

       190        200        210        220        230        240 
STGAGQTILP YILGSTEVYA QGTSWPLILE QSKTIILWSN DPYKNLQVGW NAETHESFAY 

       250        260        270        280        290        300 
LAELKEKVKQ GKIRVISIDP VVTKTQKYLG CEQLYVNPQT DVALMLGIAH EMITSKLHDE 

       310        320        330        340        350        360 
KFIEGYSLGF DRFVPYILGE SDNVAKTPEW ASKITGVSPE IIRDLAKVMT KGRTQIMMGW 

       370        380        390        400        410        420 
CIQRQQHGEQ PYWMAAVLAT MIGQIGLPGG GISYGHHYSS IGVPSSGAAA PGAFPRNLDE 

       430        440        450        460        470        480 
GQKPLFDSND FKGASSTIPI ARWIDAILEP GKTIDANGAK VTYPDIKMMV FSGNNPWSHH 

       490        500        510        520        530        540 
QDRNKMKQAF QKLECVVTVD INWTATCRFS DIVLPACTTF ERNDIDVYGS YANRGVLAMQ 

       550        560        570        580        590        600 
KMVEPLFDSL SDFDIFTRFA KIMGKETEYT RGMSEFDWIK KLYKDCKADN AGKFDMPNFD 

       610        620        630        640        650        660 
TFWKQGYVHF GEGQPWTRHA DFRDDPEMNP LGTPSGLIEI FSRKIAQFNY DDCPGHPTWI 

       670        680        690        700        710        720 
EKSERSHGGP GSDKYPMWMQ SCHPDKRLHS QMCESQQYRE TYTVQGREPV YLNPTDAKQR 

       730        740        750        760        770        780 
GIKDGDVVRV FNDRGQLLAG AVVSDSFPSG VIRIHEGAWY GPVGKDGSKE GGSEIGALCS 

       790        800        810        820        830 
YGDPNTLTQD IGTSKLAQAC SAYTCLVDFE KYQGKLPDVS SFSGPIETQL

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References

[1]"Complete sequence of Shewanella frigidimarina NCIMB 400."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. expand/collapse author list , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCIMB 400.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000447 Genomic DNA. Translation: ABI71840.1.
RefSeqYP_750678.1. NC_008345.1.

3D structure databases

ProteinModelPortalQ082H5.
SMRQ082H5. Positions 39-830.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ082H5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4278906.
GenomeReviewsGene locus Sfri_1994 in contig CP000447_GR.
KEGGsfr:Sfri_1994.
NMPDRfig|318167.10.peg.1928.
PATRIC23497981. VBISheFri14343_2071.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0243.
HOGENOMHBG304064.
OMAEEFRATY.
PhylomeDBQ082H5.
ProtClustDBPRK15102.

Family and domain databases

InterProIPR009010. Asp_de-COase-like_fold.
IPR006657. MoPterin_dinucl-bd_dom.
IPR006656. Mopterin_OxRdtase.
IPR006655. Mopterin_OxRdtase_prok_CS.
IPR006311. TAT_signal.
[Graphical view]
Gene3DG3DSA:2.40.40.20. Asp_decarboxylase-like_fold. 1 hit.
KOK07811.
PfamPF00384. Molybdopterin. 1 hit.
PF01568. Molydop_binding. 1 hit.
[Graphical view]
SUPFAMSSF50692. Asp_decarb_fold. 1 hit.
PROSITEPS00490. MOLYBDOPTERIN_PROK_2. 1 hit.
PS00932. MOLYBDOPTERIN_PROK_3. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ082H5_SHEFN
AccessionPrimary (citable) accession number: Q082H5
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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