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Protein

Aminotransferase

Gene

Sfri_2024

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-2096-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
AminotransferaseUniRule annotation (EC:2.6.1.-UniRule annotation)
Gene namesi
Ordered Locus Names:Sfri_2024Imported
OrganismiShewanella frigidimarina (strain NCIMB 400)Imported
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000000684 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi318167.Sfri_2024.

Structurei

3D structure databases

ProteinModelPortaliQ082E5.
SMRiQ082E5. Positions 2-397.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 393366Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.
OrthoDBiPOG091H00HU.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q082E5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFSQVTLAP ADPILGLTDA FKADTRSHKV NLGVGIYKDE AGQTPVLSSV
60 70 80 90 100
KKAEAILLET EKTKNYLGIE GVQAYNQVVQ ELLFGADSQI ISDKRAVTAQ
110 120 130 140 150
APGGTGALRV ASEFLVRNTK STTIWVSNPT WANHQNIFET AGLTVKEYRY
160 170 180 190 200
YKAETHDMDF DSMLVDLANA NAGDVVLLHG CCHNPTGIDL SIEQWKLVAK
210 220 230 240 250
VCLEKSLLPL FDFAYQGFGA GIDEDAQGLR AVAAVVPELL IANSFSKNFG
260 270 280 290 300
LYNERIGAVT IVAENQDDAV KSFSQIKKTI RANYSNPPAH GGLIVSTILA
310 320 330 340 350
DATLRQEWET ELTLMRERIA EMRSLFVQSL KAEGVEQDFS FISRQNGMFS
360 370 380 390
FSGLNKSQVA RLKDEFAIYI VGSGRISVAG LTKNNIPAVC KAIAQVI
Length:397
Mass (Da):43,287
Last modified:October 31, 2006 - v1
Checksum:i37C5C4C9B313EDF5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI71870.1.
RefSeqiWP_011637485.1. NC_008345.1.

Genome annotation databases

EnsemblBacteriaiABI71870; ABI71870; Sfri_2024.
KEGGisfr:Sfri_2024.
PATRICi23498039. VBISheFri14343_2100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI71870.1.
RefSeqiWP_011637485.1. NC_008345.1.

3D structure databases

ProteinModelPortaliQ082E5.
SMRiQ082E5. Positions 2-397.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318167.Sfri_2024.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI71870; ABI71870; Sfri_2024.
KEGGisfr:Sfri_2024.
PATRICi23498039. VBISheFri14343_2100.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.
OrthoDBiPOG091H00HU.

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-2096-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ082E5_SHEFN
AccessioniPrimary (citable) accession number: Q082E5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: September 7, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.