Q082D9 (Q082D9_SHEFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Riboflavin synthase, alpha subunit EMBL ABI71876.1

Gene names

Ordered Locus Names:

Sfri_2030

Organism

Shewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI71876.1

Taxonomic identifier

318167 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	204 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro riboflavin synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q082D9 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 53DAA8E210BD638D	FASTA	204	22,085
	10 20 30 40 50 60 MFTGIVQATC EVVSINNAAG LKTFEVAMTP ELTQGLVTGA SVANNGVCLT VTKILNDKVF 70 80 90 100 110 120 FDVMEETLAV TNLGNTSVGD KVNIERSLTF GTEIGGHILS GHVHTLATVK AVSDTNEHYN 130 140 150 160 170 180 IELQVEPQWM NYIFYKGFVG INGCSLTVGK VSDSGFLLHL IPETLKLTNL NHYSVGDKIN 190 200 IEIDSQTQVI VDTVERILAK KQLA

References

[1]

"Complete sequence of Shewanella frigidimarina NCIMB 400." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCIMB 400.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000447 Genomic DNA. Translation: ABI71876.1.
RefSeq	YP_750714.1. NC_008345.1.
3D structure databases
ProteinModelPortal	Q082D9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q082D9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4278942.
GenomeReviews	Gene locus Sfri_2030 in contig CP000447_GR.
KEGG	sfr:Sfri_2030.
NMPDR	fig|318167.10.peg.1961.
PATRIC	23498051. VBISheFri14343_2106.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0307.
HOGENOM	HBG289809.
OMA	HILSGHV.
PhylomeDB	Q082D9.
ProtClustDB	PRK13020.
Family and domain databases
InterPro	IPR023366. ATPase_F1/A1-cplx_a_su_N. IPR001783. Lumazine-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view]
Gene3D	G3DSA:2.40.30.20. G3DSA:2.40.30.20. 2 hits.
KO	K00793.
PANTHER	PTHR21098. Lumazine_bd. 1 hit.
Pfam	PF00677. Lum_binding. 2 hits. [Graphical view]
PIRSF	PIRSF000498. Riboflavin_syn_A. 1 hit.
SUPFAM	SSF63380. Riboflavin_synthase_like_b-brl. 2 hits.
TIGRFAMs	TIGR00187. RibE. 1 hit.
PROSITE	PS51177. LUMAZINE_BIND. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q082D9_SHEFN

Accession

Primary (citable) accession number: Q082D9

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)