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Protein

BURP domain protein RD22

Gene

RD22

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Acts to suppress chlorophyll degradation under moisture stress.1 Publication

GO - Biological processi

  • response to salt stress Source: TAIR
Complete GO annotation...

Keywords - Biological processi

Stress response

Names & Taxonomyi

Protein namesi
Recommended name:
BURP domain protein RD221 Publication
Alternative name(s):
Dehydration-responsive protein RD221 Publication
Gene namesi
Name:RD221 Publication
Ordered Locus Names:At5g25610Imported
ORF Names:T14C9.150Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G25610.

Subcellular locationi

GO - Cellular componenti

  • endosome Source: TAIR
  • Golgi apparatus Source: TAIR
  • trans-Golgi network Source: TAIR
Complete GO annotation...

Pathology & Biotechi

Disruption phenotypei

Enhanced drought tolerance.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 392370BURP domain protein RD22PRO_0000022202Add
BLAST

Proteomic databases

PaxDbiQ08298.
PRIDEiQ08298.

PTM databases

SwissPalmiQ08298.

Expressioni

Tissue specificityi

Expressed in seed (PubMed:8479424). Highest expression in leaves and guard cells (PubMed:25333723).1 Publication1 Publication

Developmental stagei

Expressed during the early and middle stages of seed development (PubMed:8479424). Abundant throughout plant development in the aerial part of the plant (PubMed:25333723).1 Publication1 Publication

Inductioni

Up-regulated by dehydration, salt stress and abscisic acid (ABA). Not regulated by cold.2 Publications

Gene expression databases

GenevisibleiQ08298. AT.

Interactioni

Protein-protein interaction databases

BioGridi17911. 1 interaction.
MINTiMINT-8066540.
STRINGi3702.AT5G25610.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati56 – 583TXV 1Curated
Repeati78 – 803TXV 2Curated
Repeati100 – 1023TXV 3Curated
Repeati125 – 1273TXV 4Curated
Domaini176 – 392217BURPPROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni57 – 1641085 X approximate repeatsAdd
BLAST

Domaini

The BURP domain located at the C-terminus has not been identified in non-plant proteins.1 Publication

Sequence similaritiesi

Contains 1 BURP domain.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiENOG410IF2V. Eukaryota.
ENOG410YDUK. LUCA.
HOGENOMiHOG000238251.
InParanoidiQ08298.
OMAiVNVNPGY.
OrthoDBiEOG09360LR1.
PhylomeDBiQ08298.

Family and domain databases

InterProiIPR004873. BURP_dom.
[Graphical view]
PfamiPF03181. BURP. 1 hit.
[Graphical view]
SMARTiSM01045. BURP. 1 hit.
[Graphical view]
PROSITEiPS51277. BURP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q08298-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIRLPLICL LGSFMVVAIA ADLTPERYWS TALPNTPIPN SLHNLLTFDF
60 70 80 90 100
TDEKSTNVQV GKGGVNVNTH KGKTGSGTAV NVGKGGVRVD TGKGKPGGGT
110 120 130 140 150
HVSVGSGKGH GGGVAVHTGK PGKRTDVGVG KGGVTVHTRH KGRPIYVGVK
160 170 180 190 200
PGANPFVYNY AAKETQLHDD PNAALFFLEK DLVRGKEMNV RFNAEDGYGG
210 220 230 240 250
KTAFLPRGEA ETVPFGSEKF SETLKRFSVE AGSEEAEMMK KTIEECEARK
260 270 280 290 300
VSGEEKYCAT SLESMVDFSV SKLGKYHVRA VSTEVAKKNA PMQKYKIAAA
310 320 330 340 350
GVKKLSDDKS VVCHKQKYPF AVFYCHKAMM TTVYAVPLEG ENGMRAKAVA
360 370 380 390
VCHKNTSAWN PNHLAFKVLK VKPGTVPVCH FLPETHVVWF SY
Length:392
Mass (Da):42,260
Last modified:November 1, 1995 - v1
Checksum:i511A76D8C59225B3
GO

Sequence cautioni

The sequence BAD93841 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence BAD94687 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D10703 Genomic DNA. Translation: BAA01546.1.
AC006601 Genomic DNA. No translation available.
CP002688 Genomic DNA. Translation: AED93472.1.
AY090244 mRNA. Translation: AAL90908.1.
AY060560 mRNA. Translation: AAL31189.1.
BT009697 mRNA. Translation: AAP88331.1.
AK220718 mRNA. Translation: BAD93841.1. Different initiation.
AK222019 mRNA. Translation: BAD94687.1. Different initiation.
PIRiS34823.
RefSeqiNP_197943.1. NM_122472.3.
UniGeneiAt.23701.

Genome annotation databases

EnsemblPlantsiAT5G25610.1; AT5G25610.1; AT5G25610.
GeneIDi832636.
GrameneiAT5G25610.1; AT5G25610.1; AT5G25610.
KEGGiath:AT5G25610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D10703 Genomic DNA. Translation: BAA01546.1.
AC006601 Genomic DNA. No translation available.
CP002688 Genomic DNA. Translation: AED93472.1.
AY090244 mRNA. Translation: AAL90908.1.
AY060560 mRNA. Translation: AAL31189.1.
BT009697 mRNA. Translation: AAP88331.1.
AK220718 mRNA. Translation: BAD93841.1. Different initiation.
AK222019 mRNA. Translation: BAD94687.1. Different initiation.
PIRiS34823.
RefSeqiNP_197943.1. NM_122472.3.
UniGeneiAt.23701.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi17911. 1 interaction.
MINTiMINT-8066540.
STRINGi3702.AT5G25610.1.

PTM databases

SwissPalmiQ08298.

Proteomic databases

PaxDbiQ08298.
PRIDEiQ08298.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G25610.1; AT5G25610.1; AT5G25610.
GeneIDi832636.
GrameneiAT5G25610.1; AT5G25610.1; AT5G25610.
KEGGiath:AT5G25610.

Organism-specific databases

TAIRiAT5G25610.

Phylogenomic databases

eggNOGiENOG410IF2V. Eukaryota.
ENOG410YDUK. LUCA.
HOGENOMiHOG000238251.
InParanoidiQ08298.
OMAiVNVNPGY.
OrthoDBiEOG09360LR1.
PhylomeDBiQ08298.

Miscellaneous databases

PROiQ08298.

Gene expression databases

GenevisibleiQ08298. AT.

Family and domain databases

InterProiIPR004873. BURP_dom.
[Graphical view]
PfamiPF03181. BURP. 1 hit.
[Graphical view]
SMARTiSM01045. BURP. 1 hit.
[Graphical view]
PROSITEiPS51277. BURP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRD22_ARATH
AccessioniPrimary (citable) accession number: Q08298
Secondary accession number(s): Q56WL9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: September 7, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.