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Protein
Submitted name:

Avirulence protein

Gene

avrP

Organism
Pseudomonas syringae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Avirulence proteinImported
Gene namesi
Name:avrPImported
OrganismiPseudomonas syringaeImported
Taxonomic identifieri317 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Interactioni

Protein-protein interaction databases

DIPiDIP-60247N.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1R5ENMR-A29-133[»]
2QKWX-ray3.20A1-164[»]
ProteinModelPortaliQ08242.
SMRiQ08242. Positions 29-133.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ08242.

Family & Domainsi

Family and domain databases

Gene3Di1.20.1270.140. 1 hit.
InterProiIPR020996. T3SS_AvrPto.
[Graphical view]
PfamiPF11592. AvrPto. 1 hit.
[Graphical view]
SUPFAMiSSF116854. SSF116854. 1 hit.

Sequencei

Sequence statusi: Complete.

Q08242-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNICVGGSR MAHQVNSPDR VSNNSGDEDN VTSSQLLSVR HQLAESAGLP
60 70 80 90 100
RDQHEFVSSQ APQSLRNRYN NLYSHTQRTL DMADMQHRYM TGASGINPGM
110 120 130 140 150
LPHENVDDMR SAITDWSDMR EALQHAMGIH ADIPPSPERF VATMNPSGSI
160
RMSTLSPSPY RNWQ
Length:164
Mass (Da):18,263
Last modified:November 1, 1996 - v1
Checksum:i18312DDCBA0490F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L20425 Genomic DNA. Translation: AAA25728.1.
PIRiS35220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L20425 Genomic DNA. Translation: AAA25728.1.
PIRiS35220.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1R5ENMR-A29-133[»]
2QKWX-ray3.20A1-164[»]
ProteinModelPortaliQ08242.
SMRiQ08242. Positions 29-133.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60247N.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ08242.

Family and domain databases

Gene3Di1.20.1270.140. 1 hit.
InterProiIPR020996. T3SS_AvrPto.
[Graphical view]
PfamiPF11592. AvrPto. 1 hit.
[Graphical view]
SUPFAMiSSF116854. SSF116854. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Molecular characterization and hrp dependence of the avirulence gene avrPto from Pseudomonas syringae pv. tomato [corrected."
    Salmeron J.M., Staskawicz B.J.
    Mol. Gen. Genet. 239:6-16(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "The solution structure of type III effector protein AvrPto reveals conformational and dynamic features important for plant pathogenesis."
    Wulf J., Pascuzzi P.E., Fahmy A., Martin G.B., Nicholson L.K.
    Structure 12:1257-1268(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 29-133.
  3. "The structural basis for activation of plant immunity by bacterial effector protein AvrPto."
    Xing W., Zou Y., Liu Q., Liu J., Luo X., Huang Q., Chen S., Zhu L., Bi R., Hao Q., Wu J.W., Zhou J.M., Chai J.
    Nature 449:243-247(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.20 ANGSTROMS).

Entry informationi

Entry nameiQ08242_PSESX
AccessioniPrimary (citable) accession number: Q08242
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 9, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.