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Q07ZT1

- Q07ZT1_SHEFN

UniProt

Q07ZT1 - Q07ZT1_SHEFN

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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sfri_2643

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-2731-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Sfri_2643Imported
OrganismiShewanella frigidimarina (strain NCIMB 400)Imported
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000684: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi318167.Sfri_2643.

Structurei

3D structure databases

ProteinModelPortaliQ07ZT1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiGMMHNLV.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q07ZT1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTSKITRQAN ASEDSLLRIF TAPEDSTSTL SIIEQKLSQD LAGFLGNSIA
60 70 80 90 100
ALEKPLSEIE TDFSAYQIPT EPKFVSDYAD EIMQNLVAHS VHTSAPSFIG
110 120 130 140 150
HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHNLVYQ
160 170 180 190 200
QSDDFYHQWM HSANHSLGAF CSGGTVANIT ALWIARNRLL QPRGDFKGVT
210 220 230 240 250
REGMTKALRF YGYDDLAILV SDRGHYSLGK TADLLGIGRD NIISIPTDEH
260 270 280 290 300
HKVDVAAMRD AAEKLAQQNI KVMAIVGIAG TTETGNVDPL TELAALASEL
310 320 330 340 350
NCHFHVDAAW GGASLLSKKY SHLLKGIELA DSVTIDAHKQ MYVPMGAGMV
360 370 380 390 400
LFKDPELAKA IVHHAEYILR VGSKDLGSQT LEGSRPGMAM LVHACLQIIG
410 420 430 440 450
RDGYEILINN SLEKARYFGS IIDQHADFEL VTAPELCLLT YRYVPKSVQA
460 470 480 490 500
ILTTALANQD SALVASINEL LDGLTQFIQK HQREQGKSFV SRTRIKPAKY
510 520 530 540
LRQPTTVFRV VLANPLTSHQ ILHDVLTEQV EIAALDSEYL PQLLAL
Length:546
Mass (Da):60,098
Last modified:October 31, 2006 - v1
Checksum:i0C13A2BE828051C1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000447 Genomic DNA. Translation: ABI72484.1.
RefSeqiWP_011638093.1. NC_008345.1.
YP_751322.1. NC_008345.1.

Genome annotation databases

EnsemblBacteriaiABI72484; ABI72484; Sfri_2643.
GeneIDi4279550.
KEGGisfr:Sfri_2643.
PATRICi23499357. VBISheFri14343_2745.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000447 Genomic DNA. Translation: ABI72484.1 .
RefSeqi WP_011638093.1. NC_008345.1.
YP_751322.1. NC_008345.1.

3D structure databases

ProteinModelPortali Q07ZT1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 318167.Sfri_2643.

Protocols and materials databases

DNASUi 4279550.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABI72484 ; ABI72484 ; Sfri_2643 .
GeneIDi 4279550.
KEGGi sfr:Sfri_2643.
PATRICi 23499357. VBISheFri14343_2745.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi GMMHNLV.
OrthoDBi EOG6MSRZP.

Enzyme and pathway databases

BioCyci SFRI318167:GIXS-2731-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCIMB 400Imported.

Entry informationi

Entry nameiQ07ZT1_SHEFN
AccessioniPrimary (citable) accession number: Q07ZT1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: October 29, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3