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Q07ZT1

- Q07ZT1_SHEFN

UniProt

Q07ZT1 - Q07ZT1_SHEFN

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sfri_2643

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (31 Oct 2006)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSFRI318167:GIXS-2731-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Sfri_2643Imported
    OrganismiShewanella frigidimarina (strain NCIMB 400)Imported
    Taxonomic identifieri318167 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000000684: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi318167.Sfri_2643.

    Structurei

    3D structure databases

    ProteinModelPortaliQ07ZT1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q07ZT1-1 [UniParc]FASTAAdd to Basket

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    MTSKITRQAN ASEDSLLRIF TAPEDSTSTL SIIEQKLSQD LAGFLGNSIA    50
    ALEKPLSEIE TDFSAYQIPT EPKFVSDYAD EIMQNLVAHS VHTSAPSFIG 100
    HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHNLVYQ 150
    QSDDFYHQWM HSANHSLGAF CSGGTVANIT ALWIARNRLL QPRGDFKGVT 200
    REGMTKALRF YGYDDLAILV SDRGHYSLGK TADLLGIGRD NIISIPTDEH 250
    HKVDVAAMRD AAEKLAQQNI KVMAIVGIAG TTETGNVDPL TELAALASEL 300
    NCHFHVDAAW GGASLLSKKY SHLLKGIELA DSVTIDAHKQ MYVPMGAGMV 350
    LFKDPELAKA IVHHAEYILR VGSKDLGSQT LEGSRPGMAM LVHACLQIIG 400
    RDGYEILINN SLEKARYFGS IIDQHADFEL VTAPELCLLT YRYVPKSVQA 450
    ILTTALANQD SALVASINEL LDGLTQFIQK HQREQGKSFV SRTRIKPAKY 500
    LRQPTTVFRV VLANPLTSHQ ILHDVLTEQV EIAALDSEYL PQLLAL 546
    Length:546
    Mass (Da):60,098
    Last modified:October 31, 2006 - v1
    Checksum:i0C13A2BE828051C1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000447 Genomic DNA. Translation: ABI72484.1.
    RefSeqiYP_751322.1. NC_008345.1.

    Genome annotation databases

    EnsemblBacteriaiABI72484; ABI72484; Sfri_2643.
    GeneIDi4279550.
    KEGGisfr:Sfri_2643.
    PATRICi23499357. VBISheFri14343_2745.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000447 Genomic DNA. Translation: ABI72484.1 .
    RefSeqi YP_751322.1. NC_008345.1.

    3D structure databases

    ProteinModelPortali Q07ZT1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 318167.Sfri_2643.

    Protocols and materials databases

    DNASUi 4279550.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABI72484 ; ABI72484 ; Sfri_2643 .
    GeneIDi 4279550.
    KEGGi sfr:Sfri_2643.
    PATRICi 23499357. VBISheFri14343_2745.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci SFRI318167:GIXS-2731-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NCIMB 400Imported.

    Entry informationi

    Entry nameiQ07ZT1_SHEFN
    AccessioniPrimary (citable) accession number: Q07ZT1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 31, 2006
    Last sequence update: October 31, 2006
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3