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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sfri_2643

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotation
LigandPyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSFRI318167:G1G77-2729-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Sfri_2643Imported
OrganismiShewanella frigidimarina (strain NCIMB 400)Imported
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei339N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi318167.Sfri_2643

Structurei

3D structure databases

ProteinModelPortaliQ07ZT1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DY8 Bacteria
COG0076 LUCA
HOGENOMiHOG000282553
KOiK01580
OMAiFHKHFFQ
OrthoDBiPOG091H05DC

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR022517 Asp_decarboxylase_pyridox
IPR002129 PyrdxlP-dep_de-COase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00282 Pyridoxal_deC, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR03799 NOD_PanD_pyr, 1 hit

Sequencei

Sequence statusi: Complete.

Q07ZT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSKITRQAN ASEDSLLRIF TAPEDSTSTL SIIEQKLSQD LAGFLGNSIA
60 70 80 90 100
ALEKPLSEIE TDFSAYQIPT EPKFVSDYAD EIMQNLVAHS VHTSAPSFIG
110 120 130 140 150
HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHNLVYQ
160 170 180 190 200
QSDDFYHQWM HSANHSLGAF CSGGTVANIT ALWIARNRLL QPRGDFKGVT
210 220 230 240 250
REGMTKALRF YGYDDLAILV SDRGHYSLGK TADLLGIGRD NIISIPTDEH
260 270 280 290 300
HKVDVAAMRD AAEKLAQQNI KVMAIVGIAG TTETGNVDPL TELAALASEL
310 320 330 340 350
NCHFHVDAAW GGASLLSKKY SHLLKGIELA DSVTIDAHKQ MYVPMGAGMV
360 370 380 390 400
LFKDPELAKA IVHHAEYILR VGSKDLGSQT LEGSRPGMAM LVHACLQIIG
410 420 430 440 450
RDGYEILINN SLEKARYFGS IIDQHADFEL VTAPELCLLT YRYVPKSVQA
460 470 480 490 500
ILTTALANQD SALVASINEL LDGLTQFIQK HQREQGKSFV SRTRIKPAKY
510 520 530 540
LRQPTTVFRV VLANPLTSHQ ILHDVLTEQV EIAALDSEYL PQLLAL
Length:546
Mass (Da):60,098
Last modified:October 31, 2006 - v1
Checksum:i0C13A2BE828051C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA Translation: ABI72484.1
RefSeqiWP_011638093.1, NC_008345.1

Genome annotation databases

EnsemblBacteriaiABI72484; ABI72484; Sfri_2643
KEGGisfr:Sfri_2643

Similar proteinsi

Entry informationi

Entry nameiQ07ZT1_SHEFN
AccessioniPrimary (citable) accession number: Q07ZT1
Entry historyiIntegrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: March 28, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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