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Q07ZT1 (Q07ZT1_SHEFN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sfri_2643 EMBL ABI72484.1
OrganismShewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI72484.1
Taxonomic identifier318167 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q07ZT1 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 0C13A2BE828051C1

FASTA54660,098
        10         20         30         40         50         60 
MTSKITRQAN ASEDSLLRIF TAPEDSTSTL SIIEQKLSQD LAGFLGNSIA ALEKPLSEIE 

        70         80         90        100        110        120 
TDFSAYQIPT EPKFVSDYAD EIMQNLVAHS VHTSAPSFIG HMTSALPYFV LPLSKMMVGL 

       130        140        150        160        170        180 
NQNLVKIETS KAFTPLERQV LGMMHNLVYQ QSDDFYHQWM HSANHSLGAF CSGGTVANIT 

       190        200        210        220        230        240 
ALWIARNRLL QPRGDFKGVT REGMTKALRF YGYDDLAILV SDRGHYSLGK TADLLGIGRD 

       250        260        270        280        290        300 
NIISIPTDEH HKVDVAAMRD AAEKLAQQNI KVMAIVGIAG TTETGNVDPL TELAALASEL 

       310        320        330        340        350        360 
NCHFHVDAAW GGASLLSKKY SHLLKGIELA DSVTIDAHKQ MYVPMGAGMV LFKDPELAKA 

       370        380        390        400        410        420 
IVHHAEYILR VGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFGS 

       430        440        450        460        470        480 
IIDQHADFEL VTAPELCLLT YRYVPKSVQA ILTTALANQD SALVASINEL LDGLTQFIQK 

       490        500        510        520        530        540 
HQREQGKSFV SRTRIKPAKY LRQPTTVFRV VLANPLTSHQ ILHDVLTEQV EIAALDSEYL 


PQLLAL 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000447 Genomic DNA. Translation: ABI72484.1.
RefSeqYP_751322.1. NC_008345.1.

3D structure databases

ProteinModelPortalQ07ZT1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING318167.Sfri_2643.

Protocols and materials databases

DNASU4279550.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI72484; ABI72484; Sfri_2643.
GeneID4279550.
KEGGsfr:Sfri_2643.
PATRIC23499357. VBISheFri14343_2745.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAGMMHNLV.
OrthoDBEOG6MSRZP.

Enzyme and pathway databases

BioCycSFRI318167:GIXS-2731-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ07ZT1_SHEFN
AccessionPrimary (citable) accession number: Q07ZT1
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)