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Protein

Ribosomal RNA large subunit methyltransferase G

Gene

rlmG

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1835) in 23S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1835) in 23S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-3215-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA large subunit methyltransferase GUniRule annotation (EC:2.1.1.174UniRule annotation)
Alternative name(s):
23S rRNA m2G1835 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RlmGUniRule annotation
Gene namesi
Name:rlmGUniRule annotation
Ordered Locus Names:Sfri_3101
OrganismiShewanella frigidimarina (strain NCIMB 400)
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000000684 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 392392Ribosomal RNA large subunit methyltransferase GPRO_0000366509Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi318167.Sfri_3101.

Structurei

3D structure databases

ProteinModelPortaliQ07YH6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RlmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000246323.
KOiK00564.
OMAiFHQQQVV.
OrthoDBiPOG091H05RK.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01859. 23SrRNA_methyltr_G. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR017237. rRNA_m2G-MeTrfase_RsmD.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037565. RRNA_m2G_Mtase_RsmD_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

Q07YH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTQFACSGI ELELFRYPSQ QASNLQAWDA ADEHLVKYLI DTEITATTTA
60 70 80 90 100
ILNDNFGALT CALTMQYPHS ELLVETDAKT SLLGYQQNLL HNKLASTNIH
110 120 130 140 150
WLNSRETLPQ NIQLVLMKLP KNLHYFGQQL ARLSTVLPAG TQILIGAKAK
160 170 180 190 200
SINPALLASI EKNLGPASAS LAWKKTRVIS CISDGKKRSL AKAVSWNVDE
210 220 230 240 250
LKLTISNLAN VFAANKLDIG ARIMLDNMPK GEFKHIIDLG CGNGILGLHA
260 270 280 290 300
KQCYPNAQIH FVDDSDMAIA SAKHNWQANE LDTPSQDLQS QDPQTEQMPQ
310 320 330 340 350
AFFHWDDCLS NLPADVEPDL VICNPPFHQG EAITDHIAWQ MFVDAHKRLK
360 370 380 390
KGGLLHIVGN RHLAYHVKIN RIFKNCTTVA SNGKFVILQA IK
Length:392
Mass (Da):43,460
Last modified:October 31, 2006 - v1
Checksum:iEC646F5979966691
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI72938.1.
RefSeqiWP_011638544.1. NC_008345.1.

Genome annotation databases

EnsemblBacteriaiABI72938; ABI72938; Sfri_3101.
KEGGisfr:Sfri_3101.
PATRICi23500347. VBISheFri14343_3214.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI72938.1.
RefSeqiWP_011638544.1. NC_008345.1.

3D structure databases

ProteinModelPortaliQ07YH6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318167.Sfri_3101.

Protocols and materials databases

DNASUi4280004.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI72938; ABI72938; Sfri_3101.
KEGGisfr:Sfri_3101.
PATRICi23500347. VBISheFri14343_3214.

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000246323.
KOiK00564.
OMAiFHQQQVV.
OrthoDBiPOG091H05RK.

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-3215-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01859. 23SrRNA_methyltr_G. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR017237. rRNA_m2G-MeTrfase_RsmD.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037565. RRNA_m2G_Mtase_RsmD_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRLMG_SHEFN
AccessioniPrimary (citable) accession number: Q07YH6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: October 31, 2006
Last modified: September 7, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.