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Protein

Ribosomal RNA small subunit methyltransferase J

Gene

rsmJ

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the guanosine in position 1516 of 16S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1516) in 16S rRNA = S-adenosyl-L-homocysteine + N2-methylguanine(1516) in 16S rRNA.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei195S-adenosyl-L-methionineUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionMethyltransferase, Transferase
Biological processrRNA processing
LigandS-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase JUniRule annotation (EC:2.1.1.242UniRule annotation)
Alternative name(s):
16S rRNA m2G1516 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferaseUniRule annotation
Gene namesi
Name:rsmJUniRule annotation
Ordered Locus Names:Sfri_3857
OrganismiShewanella frigidimarina (strain NCIMB 400)
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000000684 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002926451 – 275Ribosomal RNA small subunit methyltransferase JAdd BLAST275

Proteomic databases

PRIDEiQ07WD2

Interactioni

Protein-protein interaction databases

STRINGi318167.Sfri_3857

Structurei

3D structure databases

ProteinModelPortaliQ07WD2
SMRiQ07WD2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni121 – 122S-adenosyl-L-methionine bindingUniRule annotation2
Regioni137 – 138S-adenosyl-L-methionine bindingUniRule annotation2
Regioni173 – 174S-adenosyl-L-methionine bindingUniRule annotation2

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmJ family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105FFN Bacteria
ENOG410XPRJ LUCA
HOGENOMiHOG000218236
KOiK15984
OMAiSRYDIYP
OrthoDBiPOG091H01DK

Family and domain databases

HAMAPiMF_01523 16SrRNA_methyltr_J, 1 hit
InterProiView protein in InterPro
IPR007536 16SrRNA_methylTrfase_J
IPR029063 SAM-dependent_MTases
PANTHERiPTHR36112 PTHR36112, 1 hit
PfamiView protein in Pfam
PF04445 SAM_MT, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit

Sequencei

Sequence statusi: Complete.

Q07WD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFTGDGFWHN GVVSYIGMVI ILLQTPIFFN QQYPSLVDIA QRWQLVWDKD
60 70 80 90 100
AAFELRFDQN CLSLHKRDEP KLDGISVDFV SGAVAHRRKF GGGRGQSIAK
110 120 130 140 150
AVGLKQGVTP TVVDGTAGLG RDAFVLASLG CKVIMVERHP VVAALLEDGL
160 170 180 190 200
RRAYEDAEIG EWMRDLMSLF HGSSISALAD AAQSSGTEID VVYLDPMYPH
210 220 230 240 250
REKSALVKKE MRVFQTLVGA DLDADGLLAP AMALATKRVV VKRPDYAEDL
260 270
DGVKPSMVIA TKKNRFDVYV KSAMK
Length:275
Mass (Da):30,247
Last modified:October 31, 2006 - v1
Checksum:iA19A78B29D1D81D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA Translation: ABI73682.1

Genome annotation databases

EnsemblBacteriaiABI73682; ABI73682; Sfri_3857
KEGGisfr:Sfri_3857

Similar proteinsi

Entry informationi

Entry nameiRSMJ_SHEFN
AccessioniPrimary (citable) accession number: Q07WD2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: October 31, 2006
Last modified: May 23, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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