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Q07W62 (Q07W62_SHEFN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosyl transferase, family 25 EMBL ABI73752.1
Gene names
Ordered Locus Names:Sfri_3927
OrganismShewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI73752.1
Taxonomic identifier318167 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length250 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ABI73752.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlipopolysaccharide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q07W62 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 57F8D94973C46E3B

FASTA25029,114
        10         20         30         40         50         60 
MKFKVFLINL DNSTERFTFM DEQLKQLGVE YQRISAVYGK DLHDTEIAKV YDPQTNLQKY 

        70         80         90        100        110        120 
DKKLNLGEIG CYLSHVQCWQ MIIEQQLDYA LILEDDSILD PALMTVIQHI NNLSADWDYI 

       130        140        150        160        170        180 
KLCHGRKPKG IVKSIVLDDR FSLSTCLKLP ASTRGQCVSL AGAQKLLATA YPIARPVDID 

       190        200        210        220        230        240 
IQFWFEKQLR CFVVRPFPVI GTDLDSDINR QGRRTNVERH HLLRIWQKMK FELNLLKYKQ 

       250 
QLPSLPKIQK

« Hide

References

[1]"Complete sequence of Shewanella frigidimarina NCIMB 400."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. expand/collapse author list , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCIMB 400.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000447 Genomic DNA. Translation: ABI73752.1.
RefSeqYP_752591.1. NC_008345.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ07W62.

Protein family/group databases

CAZyGT25. Glycosyltransferase Family 25.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4280818.
GenomeReviewsGene locus Sfri_3927 in contig CP000447_GR.
KEGGsfr:Sfri_3927.
NMPDRfig|318167.10.peg.3745.
PATRIC23502081. VBISheFri14343_4067.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3306.
HOGENOMHBG682497.
OMAYAYPIRM.
ProtClustDBCLSK953369.

Family and domain databases

InterProIPR002654. Glyco_trans_25.
[Graphical view]
KOK07270.
PfamPF01755. Glyco_transf_25. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ07W62_SHEFN
AccessionPrimary (citable) accession number: Q07W62
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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