Q07W49 (Q07W49_SHEFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Rhodanese domain protein EMBL ABI73765.1

Gene names

Ordered Locus Names:

Sfri_3940

Organism

Shewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI73765.1

Taxonomic identifier

318167 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	102 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q07W49 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: A71B94A4EFA75DA7	FASTA	102	10,994
	10 20 30 40 50 60 MSGFKHLSIN ELIHMSTESN DIQVVDIRDA ASFAAGHIEG ATHLTNENLA DFIGDADMDK 70 80 90 100 PVVVVCYHGM SSQSAASYLN EQGFDDIYSL DGGYSAWSLA HA

References

[1]

"Complete sequence of Shewanella frigidimarina NCIMB 400." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCIMB 400.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000447 Genomic DNA. Translation: ABI73765.1.
RefSeq	YP_752604.1. NC_008345.1.
3D structure databases
ProteinModelPortal	Q07W49.
ModBase	Search...
Protein-protein interaction databases
STRING	Q07W49.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4280831.
GenomeReviews	Gene locus Sfri_3940 in contig CP000447_GR.
KEGG	sfr:Sfri_3940.
NMPDR	fig|318167.10.peg.3758.
PATRIC	23502107. VBISheFri14343_4080.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0607.
HOGENOM	HBG743107.
OMA	PLIVVCY.
PhylomeDB	Q07W49.
ProtClustDB	CLSK907761.
Family and domain databases
InterPro	IPR001763. Rhodanese-like. [Graphical view]
Gene3D	G3DSA:3.40.250.10. Rhodanese-like. 1 hit.
KO	K02439.
Pfam	PF00581. Rhodanese. 1 hit. [Graphical view]
SMART	SM00450. RHOD. 1 hit. [Graphical view]
SUPFAM	SSF52821. Rhodanese-like. 1 hit.
PROSITE	PS50206. RHODANESE_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q07W49_SHEFN

Accession

Primary (citable) accession number: Q07W49

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)