Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q07UK3 (Q07UK3_RHOP5) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.39 EMBL ABJ04381.1
Gene names
Ordered Locus Names:RPE_0422 EMBL ABJ04381.1
OrganismRhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP] EMBL ABJ04381.1
Taxonomic identifier316055 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ABJ04381.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q07UK3 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 1B35C7A8DFB5D546

FASTA43246,701
        10         20         30         40         50         60 
MTPDDIAGFY ANRADLNMAD YIELDFEFEC AGDPREAAAH LCSEQSTAQW HRVGIDEDFR 

        70         80         90        100        110        120 
PRFAARVLDL HAEPQPSGFS IDVTCAATGP VHAVRVTIAH PHGNFGPKLP NLLSAVCGEG 

       130        140        150        160        170        180 
VYFAPGIPLI RLQDIRFPDN YLEAFQGPQF GIAGLRQLLQ AFDRPIFFGV IKPNIGLSAE 

       190        200        210        220        230        240 
PFAELGYQSW IGGLDIAKDD EMLADVEWCP LAERAAALGA ARRRAEQETG VPKMYLANIT 

       250        260        270        280        290        300 
DEVDQLIPLH DLAVKNGANA LLVNAMPVGL SGVRMLRKHA KVPLIAHFPF IAAFSRLARY 

       310        320        330        340        350        360 
GIHSRVLTRL QRLAGFDVVI MPGFGPRMMT PEHEVLECVR ACLEPMGPIK PCLPVPGGSD 

       370        380        390        400        410        420 
NALTLEGLYR KVGTTDFGFV PGRGVFGHPM GPAGGAASIR QAWNAIASGI PVADYATNNP 

       430 
ELAAAFAAFG KR 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisA53."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisA53 EMBL ABJ04381.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000463 Genomic DNA. Translation: ABJ04381.1.
RefSeqYP_779361.1. NC_008435.1.

3D structure databases

ProteinModelPortalQ07UK3.
SMRQ07UK3. Positions 1-429.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316055.RPE_0422.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABJ04381; ABJ04381; RPE_0422.
GeneID4360262.
KEGGrpe:RPE_0422.
PATRIC23255334. VBIRhoPal93214_0432.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAFECAGDP.
OrthoDBEOG62K1SK.

Enzyme and pathway databases

BioCycRPAL316055:GHR9-426-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ07UK3_RHOP5
AccessionPrimary (citable) accession number: Q07UK3
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)