Q07TQ2 (Q07TQ2_RHOP5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABJ04682.1

Gene names

Ordered Locus Names:

RPE_0725 EMBL ABJ04682.1

Organism

Rhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP] EMBL ABJ04682.1

Taxonomic identifier

316055 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	587 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABJ04682.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q07TQ2 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: D35C3DDF8C980C9B	FASTA	587	65,096
	10 20 30 40 50 60 MNRFAELLDR LAYEPGRNAK LRLITNYFRA TEDPDRGFAL AALTGALSFR HAKPGLIRDL 70 80 90 100 110 120 IASRADPVLF ALSYDYVGDL SETVALMWPK AIFSPPSCGE GTGVGVPAIS SASGHPHPSP 130 140 150 160 170 180 PHKGEGAGRA WGDHNNPPPP TLTEVVTTLA TLGKAELPAQ LMRWLDELDE TGRWALLKLV 190 200 210 220 230 240 TGSLRIGISA RLAKTAAAAL GDKDPHEVEL IWPGLVPPYL DLFAWLEGRG PEPVNRDPAP 250 260 270 280 290 300 FRPVMLAHAI DDTDFAALDA ADYVAEWKWD GIRVQAVSGR DVHGTTVARL YSRSGEDITK 310 320 330 340 350 360 SFPDLLPSLR LPGAIDGELL IVRDGLVQSF NVLQQRLNRK SVTPKLMQEF PIHLRAYDLL 370 380 390 400 410 420 GDGDNDLRNL PFEQRRAKLE SFVAALDDPR IDLSATIAFA DWDALSAARR DPASAGAGHD 430 440 450 460 470 480 ADAVEGVMLK RRDALYLPGR PKGQWWKWKH DPHLVDAVLM YAQRGHGKRS SYYSDYTFGL 490 500 510 520 530 540 WTQSDAGEVL VPVGKAYFGF TDEELLQIDR FVRRHTTEKF GPVRHVVHEP DQGLVLEVAF 550 560 570 580 EGLQRSPRHK SGVAMRFPRI NRLRWDKPPR DADRLATLER MLDKASS

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisA53." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisA53 EMBL ABJ04682.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000463 Genomic DNA. Translation: ABJ04682.1.
RefSeq	YP_779662.1. NC_008435.1.
3D structure databases
ProteinModelPortal	Q07TQ2.
ModBase	Search...
Protein-protein interaction databases
STRING	316055.RPE_0725.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABJ04682; ABJ04682; RPE_0725.
GeneID	4358198.
KEGG	rpe:RPE_0725.
PATRIC	23255960. VBIRhoPal93214_0740.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	RPAL316055:GHR9-783-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q07TQ2_RHOP5

Accession

Primary (citable) accession number: Q07TQ2

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)