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Q07TQ2 (Q07TQ2_RHOP5) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RPE_0725 EMBL ABJ04682.1
OrganismRhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP] EMBL ABJ04682.1
Taxonomic identifier316055 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length587 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABJ04682.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q07TQ2 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: D35C3DDF8C980C9B

FASTA58765,096
        10         20         30         40         50         60 
MNRFAELLDR LAYEPGRNAK LRLITNYFRA TEDPDRGFAL AALTGALSFR HAKPGLIRDL 

        70         80         90        100        110        120 
IASRADPVLF ALSYDYVGDL SETVALMWPK AIFSPPSCGE GTGVGVPAIS SASGHPHPSP 

       130        140        150        160        170        180 
PHKGEGAGRA WGDHNNPPPP TLTEVVTTLA TLGKAELPAQ LMRWLDELDE TGRWALLKLV 

       190        200        210        220        230        240 
TGSLRIGISA RLAKTAAAAL GDKDPHEVEL IWPGLVPPYL DLFAWLEGRG PEPVNRDPAP 

       250        260        270        280        290        300 
FRPVMLAHAI DDTDFAALDA ADYVAEWKWD GIRVQAVSGR DVHGTTVARL YSRSGEDITK 

       310        320        330        340        350        360 
SFPDLLPSLR LPGAIDGELL IVRDGLVQSF NVLQQRLNRK SVTPKLMQEF PIHLRAYDLL 

       370        380        390        400        410        420 
GDGDNDLRNL PFEQRRAKLE SFVAALDDPR IDLSATIAFA DWDALSAARR DPASAGAGHD 

       430        440        450        460        470        480 
ADAVEGVMLK RRDALYLPGR PKGQWWKWKH DPHLVDAVLM YAQRGHGKRS SYYSDYTFGL 

       490        500        510        520        530        540 
WTQSDAGEVL VPVGKAYFGF TDEELLQIDR FVRRHTTEKF GPVRHVVHEP DQGLVLEVAF 

       550        560        570        580 
EGLQRSPRHK SGVAMRFPRI NRLRWDKPPR DADRLATLER MLDKASS 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisA53."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisA53 EMBL ABJ04682.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000463 Genomic DNA. Translation: ABJ04682.1.
RefSeqYP_779662.1. NC_008435.1.

3D structure databases

ProteinModelPortalQ07TQ2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316055.RPE_0725.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABJ04682; ABJ04682; RPE_0725.
GeneID4358198.
KEGGrpe:RPE_0725.
PATRIC23255960. VBIRhoPal93214_0740.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Enzyme and pathway databases

BioCycRPAL316055:GHR9-734-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ07TQ2_RHOP5
AccessionPrimary (citable) accession number: Q07TQ2
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: April 16, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)