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Q07TQ2

- Q07TQ2_RHOP5

UniProt

Q07TQ2 - Q07TQ2_RHOP5

Protein
Submitted name:

ATP dependent DNA ligase

Gene

RPE_0725

Organism
Rhodopseudomonas palustris (strain BisA53)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (31 Oct 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRPAL316055:GHR9-734-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:RPE_0725Imported
    OrganismiRhodopseudomonas palustris (strain BisA53)Imported
    Taxonomic identifieri316055 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
    ProteomesiUP000000654: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi316055.RPE_0725.

    Structurei

    3D structure databases

    ProteinModelPortaliQ07TQ2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q07TQ2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNRFAELLDR LAYEPGRNAK LRLITNYFRA TEDPDRGFAL AALTGALSFR    50
    HAKPGLIRDL IASRADPVLF ALSYDYVGDL SETVALMWPK AIFSPPSCGE 100
    GTGVGVPAIS SASGHPHPSP PHKGEGAGRA WGDHNNPPPP TLTEVVTTLA 150
    TLGKAELPAQ LMRWLDELDE TGRWALLKLV TGSLRIGISA RLAKTAAAAL 200
    GDKDPHEVEL IWPGLVPPYL DLFAWLEGRG PEPVNRDPAP FRPVMLAHAI 250
    DDTDFAALDA ADYVAEWKWD GIRVQAVSGR DVHGTTVARL YSRSGEDITK 300
    SFPDLLPSLR LPGAIDGELL IVRDGLVQSF NVLQQRLNRK SVTPKLMQEF 350
    PIHLRAYDLL GDGDNDLRNL PFEQRRAKLE SFVAALDDPR IDLSATIAFA 400
    DWDALSAARR DPASAGAGHD ADAVEGVMLK RRDALYLPGR PKGQWWKWKH 450
    DPHLVDAVLM YAQRGHGKRS SYYSDYTFGL WTQSDAGEVL VPVGKAYFGF 500
    TDEELLQIDR FVRRHTTEKF GPVRHVVHEP DQGLVLEVAF EGLQRSPRHK 550
    SGVAMRFPRI NRLRWDKPPR DADRLATLER MLDKASS 587
    Length:587
    Mass (Da):65,096
    Last modified:October 31, 2006 - v1
    Checksum:iD35C3DDF8C980C9B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000463 Genomic DNA. Translation: ABJ04682.1.
    RefSeqiYP_779662.1. NC_008435.1.

    Genome annotation databases

    EnsemblBacteriaiABJ04682; ABJ04682; RPE_0725.
    GeneIDi4358198.
    KEGGirpe:RPE_0725.
    PATRICi23255960. VBIRhoPal93214_0740.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000463 Genomic DNA. Translation: ABJ04682.1 .
    RefSeqi YP_779662.1. NC_008435.1.

    3D structure databases

    ProteinModelPortali Q07TQ2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316055.RPE_0725.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ04682 ; ABJ04682 ; RPE_0725 .
    GeneIDi 4358198.
    KEGGi rpe:RPE_0725.
    PATRICi 23255960. VBIRhoPal93214_0740.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci RPAL316055:GHR9-734-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BisA53Imported.

    Entry informationi

    Entry nameiQ07TQ2_RHOP5
    AccessioniPrimary (citable) accession number: Q07TQ2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 31, 2006
    Last sequence update: October 31, 2006
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3