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Q07QS9 (Q07QS9_RHOP5) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:RPE_1757
OrganismRhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP]
Taxonomic identifier316055 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length720 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3381Proton acceptor By similarity HAMAP MF_00641
Active site6291Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
Q07QS9 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: C709A5B0637E13C3

FASTA72077,593
        10         20         30         40         50         60 
MKRIDAHGLQ ISPVLFDFIA KEAAPKTGVA PDAFWAGLAG IVQDLGPKVG ALLKVRDELQ 

        70         80         90        100        110        120 
AKIDAWHLAN KGKKQDMAAY TAFLKEIGYL LPEPATMAVE TANIDAEIGQ LCGPQLVVPL 

       130        140        150        160        170        180 
SNARYALNAA NARWGSLYDA FYGTDAIPHD ATETGKGYNK ARGDKVIAKA KALLDQAAPL 

       190        200        210        220        230        240 
ATASHTDVTS YSVIAGQLSV KLKSGNSTGL KNAAQFAGFQ GDAAVPTAIL LVNNGLHIEI 

       250        260        270        280        290        300 
KIDRASVIGK DDAAGVADMI LESAVSTILD MEDSVAAVDA EDKVLIYRNV LGLMDGTLSA 

       310        320        330        340        350        360 
DFEKGGKTLT RAMNADRSYQ TPDGKGLTLH GRSLLLMRNV GHHMYTDAVL DSTGAEIPEG 

       370        380        390        400        410        420 
FLDAAVAGLL AIPDLKGTSK TRNSRTGSVY IVKPKMHGPD EVALTVDLFG RVEKVLGLPE 

       430        440        450        460        470        480 
NTLKVGIMDE ERRTTVNLKA CIQNASKRIV FINTGFLDRT GDEIHTSMEA GPMIRKNEMK 

       490        500        510        520        530        540 
AQPWIKAYED WNVDIGLIDS LPGHAQIGKG MWAAPDKMAD MLAQKIGHPQ AGATTAWVPS 

       550        560        570        580        590        600 
PTAATLHALH YHQVDVLKRQ QELKTGGPRA KLDDILTIPV SQSNWAPDDV RQEIDNNCQG 

       610        620        630        640        650        660 
ILGYVVRWID QGVGCSKVPD IHDVGLMEDR ATLRISSQHL ANWLHHGVVT QDQVMESLKR 

       670        680        690        700        710        720 
MAVVVDKQNE GDPLYKPMAP SFDGVAFKAA SDLIFKGRAQ PNGYTEFILT ARRREAKAAG

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References

[1]"Complete sequence of Rhodopseudomonas palustris BisA53."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisA53.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000463 Genomic DNA. Translation: ABJ05705.1.
RefSeqYP_780685.1. NC_008435.1.

3D structure databases

ProteinModelPortalQ07QS9.
SMRQ07QS9. Positions 9-718.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ07QS9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4358512.
GenomeReviewsGene locus RPE_1757 in contig CP000463_GR.
KEGGrpe:RPE_1757.
PATRIC23258074. VBIRhoPal93214_1789.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHBG350005.
OMAPKMHGPD.
ProtClustDBPRK02999.

Enzyme and pathway databases

BioCycRPAL316055:RPE_1757-MONOMER.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ07QS9_RHOP5
AccessionPrimary (citable) accession number: Q07QS9
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info