Q07NE5 (Q07NE5_RHOP5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-dehydro-3-deoxyphosphooctonate aldolase EMBL ABJ06539.1

Gene names

Ordered Locus Names:

RPE_2601

Organism

Rhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP]

Taxonomic identifier

316055 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	305 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. SAAS SAAS006269
Pathway	Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS006269 Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. SAAS SAAS006269
Subcellular location	Cytoplasm By similarity SAAS SAAS006269.

Ontologies

Keywords
Biological process	Lipopolysaccharide biosynthesis SAAS SAAS006269
Cellular component	Cytoplasm SAAS SAAS006269
Molecular function	Transferase SAAS SAAS006269
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3-deoxy-8-phosphooctulonate synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q07NE5 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 4F3C76E6966F2C93	FASTA	305	31,507
	10 20 30 40 50 60 MPGSRPAWSA PVCIFSKESA LTAPAAAPVV TAGNVSFGNA LPLSIIAGPC QLESRAHALE 70 80 90 100 110 120 VAGALKEIST RLGIGLVFKT SFDKANRTSA SAARGVGLND ALPVFAEIRE TLGLPVLTDV 130 140 150 160 170 180 HEIEQCARAA EAVDVLQIPA FLCRQTDLLL AAAATGKVVN VKKGQFLAPW DMANVVAKLV 190 200 210 220 230 240 GAGNPNVLVT ERGASFGYNT LVSDMRALPI MARTTGAPVI FDATHSVQQP GGKGTSSGGE 250 260 270 280 290 300 REFVPVLARA AVAVGVAGVF IETHPDPDHA PSDGPNMVPL REFEALVRRL MQFDALAKAT AGGAA

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisA53." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisA53.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000463 Genomic DNA. Translation: ABJ06539.1.
RefSeq	YP_781519.1. NC_008435.1.
3D structure databases
ProteinModelPortal	Q07NE5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q07NE5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4360278.
GenomeReviews	Gene locus RPE_2601 in contig CP000463_GR.
KEGG	rpe:RPE_2601.
PATRIC	23259766. VBIRhoPal93214_2629.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2877.
HOGENOM	HBG575990.
OMA	ESRDHAF.
ProtClustDB	PRK05198.
Enzyme and pathway databases
BioCyc	RPAL316055:RPE_2601-MONOMER.
Family and domain databases
HAMAP	MF_00056. KDO8P_synth. [Tree]
InterPro	IPR013785. Aldolase_TIM. IPR006218. DAHP1/KDSA. IPR006269. KDO8P_synthase. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01627.
PANTHER	PTHR21057:SF2. KDO8P_synthase. 1 hit.
Pfam	PF00793. DAHP_synth_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR01362. KDO8P_synth. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q07NE5_RHOP5

Accession

Primary (citable) accession number: Q07NE5

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)