Q07L10 (Q07L10_RHOP5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribodipyrimidine photo-lyase type I EMBL ABJ07374.1
EC=4.1.99.3 EMBL ABJ07374.1

Gene names

Ordered Locus Names:

RPE_3442 EMBL ABJ07374.1

Organism

Rhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP] EMBL ABJ07374.1

Taxonomic identifier

316055 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	483 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DNA photolyase class-1 family. RuleBase RU004182

Ontologies

Keywords
Ligand	Chromophore RuleBase RU004291 FAD RuleBase RU004291 Flavoprotein RuleBase RU004291
Molecular function	Lyase EMBL ABJ07374.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro protein-chromophore linkage Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	deoxyribodipyrimidine photo-lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q07L10 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 232F9CB146BE3E8C	FASTA	483	52,921
	10 20 30 40 50 60 MAISPPRPSL VWFRDDLRLS DHPALNAAAS SGRPVLCLYV LDEQSPGGRP LGGAARWWLA 70 80 90 100 110 120 QSLRSLQQIL SERGATLMLR RGAAAQVVAG LARETNAEVV YYNDIAMAPA RTVAAELAAT 130 140 150 160 170 180 LADHGIAVHQ HPGDLLAAPE TIRTKEGRGL RVFTPFWKRV LSLGDPAKPL PAPTALGPPP 190 200 210 220 230 240 AAASDRLDDW ALEPTAPDWA GGLRAAWQPG EAAAQRALTD FLTTGIAGYA GDRDRPDRPG 250 260 270 280 290 300 TSLLSPHLRF GEIGPRQIWH AARFAAAARP AIAGDVDKFL SELGWREFCR HLLFDHSDLA 310 320 330 340 350 360 TRNLQPAFDA FPWVEDPAGL RAWQRGLTGY PIVDAGMRQL WQTGVMHNRV RMVVASFLVK 370 380 390 400 410 420 HLLIDWRCGE QWFWDTLVDA DAGSNPGNWQ WVAGCGADAA PYFRVFNPIL QGEKFDPDGA 430 440 450 460 470 480 YVRRFVPELA RLPAALIHQP WTATPLELAS AGVQLGHNYP EPIIEHRRGR ERALAAYATV RKT

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisA53." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisA53 EMBL ABJ07374.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000463 Genomic DNA. Translation: ABJ07374.1.
RefSeq	YP_782354.1. NC_008435.1.
3D structure databases
ProteinModelPortal	Q07L10.
ModBase	Search...
Protein-protein interaction databases
STRING	316055.RPE_3442.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABJ07374; ABJ07374; RPE_3442.
GeneID	4361129.
KEGG	rpe:RPE_3442.
PATRIC	23261496. VBIRhoPal93214_3484.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0415.
HOGENOM	HOG000245621.
KO	K01669.
OMA	CKVDFWL.
ProtClustDB	CLSK819767.
Enzyme and pathway databases
BioCyc	RPAL316055:GHR9-3497-MONOMER.
Family and domain databases
Gene3D	3.40.50.620. 1 hit.
InterPro	IPR002081. Cryptochrome/DNA_photolyase_1. IPR018394. DNA_photolyase_1_CS_C. IPR006050. DNA_photolyase_N. IPR005101. Photolyase_FAD-bd/Cryptochr_C. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view]
Pfam	PF00875. DNA_photolyase. 1 hit. PF03441. FAD_binding_7. 1 hit. [Graphical view]
PRINTS	PR00147. DNAPHOTLYASE.
SUPFAM	SSF52425. DNA_photolyase_N. 1 hit. SSF48173. Photolyase_FAD-bd/Cryptochr_C. 1 hit.
PROSITE	PS00394. DNA_PHOTOLYASES_1_1. 1 hit. PS00691. DNA_PHOTOLYASES_1_2. 1 hit. PS51645. PHR_CRY_ALPHA_BETA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q07L10_RHOP5

Accession

Primary (citable) accession number: Q07L10

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)