Q07K62 (Q07K62_RHOP5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Bacterial translation initiation factor 1 (BIF-1) EMBL ABJ07672.1

Gene names

Ordered Locus Names:

RPE_3743

Organism

Rhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP]

Taxonomic identifier

316055 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	94 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Contains 1 S1-like domain. RuleBase RU004366

Ontologies

Keywords
Biological process	Protein biosynthesis
Molecular function	Initiation factor EMBL ABJ07672.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	translation initiation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q07K62 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: B8CA9FF0F35A9010	FASTA	94	10,703
	10 20 30 40 50 60 MAKEELIQFE GLVTEILPDA RYRVQLDAGH EIVAYTAGKM KKNRIKTLAG DRVTIEMSPY 70 80 90 DLEKGRLIFR HKDERPGAGG PPRGTPPRGQ FRRR

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisA53." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisA53.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000463 Genomic DNA. Translation: ABJ07672.1.
RefSeq	YP_782652.1. NC_008435.1.
3D structure databases
ProteinModelPortal	Q07K62.
ModBase	Search...
Protein-protein interaction databases
STRING	Q07K62.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4361435.
GenomeReviews	Gene locus RPE_3743 in contig CP000463_GR.
KEGG	rpe:RPE_3743.
PATRIC	23262108. VBIRhoPal93214_3785.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0361.
HOGENOM	HBG286099.
OMA	VQLDAGH.
ProtClustDB	PRK00276.
Enzyme and pathway databases
BioCyc	RPAL316055:RPE_3743-MONOMER.
Family and domain databases
HAMAP	MF_00075. IF_1. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR022967. RNA-binding_domain_S1. IPR006196. RNA-binding_domain_S1_IF1. IPR004368. TIF_IF1. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02518.
Pfam	PF01176. eIF-1a. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00008. InfA. 1 hit.
PROSITE	PS50832. S1_IF1_TYPE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q07K62_RHOP5

Accession

Primary (citable) accession number: Q07K62

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)