ID   Q07JS3_RHOP5            Unreviewed;       552 AA.
AC   Q07JS3;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   27-MAR-2024, entry version 107.
DE   SubName: Full=Transcriptional regulator, NifA subfamily, Fis family {ECO:0000313|EMBL:ABJ07811.1};
GN   OrderedLocusNames=RPE_3885 {ECO:0000313|EMBL:ABJ07811.1};
OS   Rhodopseudomonas palustris (strain BisA53).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Rhodopseudomonas.
OX   NCBI_TaxID=316055 {ECO:0000313|EMBL:ABJ07811.1};
RN   [1] {ECO:0000313|EMBL:ABJ07811.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisA53 {ECO:0000313|EMBL:ABJ07811.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y.,
RA   Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisA53.";
RL   Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000463; ABJ07811.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q07JS3; -.
DR   STRING; 316055.RPE_3885; -.
DR   KEGG; rpe:RPE_3885; -.
DR   eggNOG; COG3604; Bacteria.
DR   HOGENOM; CLU_000445_95_2_5; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003018; GAF.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF01590; GAF; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00065; GAF; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   Activator {ECO:0000256|ARBA:ARBA00023159};
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Two-component regulatory system {ECO:0000256|ARBA:ARBA00023012}.
FT   DOMAIN          233..462
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   552 AA;  61360 MW;  A3CFC6744215E8BD CRC64;
     MHISIYPFDY NEADPLDALV IDLDVGMPIE EFSHCFTGEC RVNVLPILYK LNQVISVSAD
     LAEPLRIILD IMQRNLKMVR GVITLYDRRS ETIFIHESFG LSEEEKKRGV YALGEGITGK
     VVESGKVIIV PRLTESPEFL DRTGADHKRQ NTAFFCVPIM LGQKVLGTIG AERVYMNRTL
     LKQDAEFLAA IALMIAPAVE LFLMTNIDKV RLENENLRLK NALKERYKPS NIIGNSKSMQ
     DDVYELIGKV AGTRATVLIL GESGVGKELV ANAIHYNSAH SEGPFIKFNC AAIPEHLAES
     ELFGHEKGAF TGALATHKGS FEQADGGSIF LDEVGELIPS VQAKLLRVLQ ERTIERVGSG
     KPIKVDVRII AATNRDLTER VASGDFREDL FYRLNVVPVT VPPLRERGSD VILLADYFIS
     RSSKANGKTV KRISTPALNM LMSYHWPGNV RELENVIERA VILSDDDVIH GYDLPPSLQT
     PKESGTKFGL SLEEKTRAVE YEMIVEALKN SNGKIGEAAA ELGLTRRMLG VRMERYGISH
     KSFRTTALRS ND
//