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Protein

Putative thymidine phosphorylase

Gene

RPE_4149

Organism
Rhodopseudomonas palustris (strain BisA53)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciRPAL316055:G1G7C-4182-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
Alternative name(s):
TdRPaseUniRule annotation
Gene namesi
Ordered Locus Names:RPE_4149
OrganismiRhodopseudomonas palustris (strain BisA53)
Taxonomic identifieri316055 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000000654 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003147141 – 513Putative thymidine phosphorylaseAdd BLAST513

Proteomic databases

PRIDEiQ07J10

Interactioni

Protein-protein interaction databases

STRINGi316055.RPE_4149

Structurei

3D structure databases

ProteinModelPortaliQ07J10
SMRiQ07J10
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CMW Bacteria
COG0213 LUCA
HOGENOMiHOG000252767
KOiK00758
OMAiQMVASIM
OrthoDBiPOG091H02BC

Family and domain databases

Gene3Di3.40.1030.10, 2 hits
3.90.1170.30, 1 hit
HAMAPiMF_00703 Thymid_phosp_2, 1 hit
InterProiView protein in InterPro
IPR000312 Glycosyl_Trfase_fam3
IPR017459 Glycosyl_Trfase_fam3_N_dom
IPR036320 Glycosyl_Trfase_fam3_N_dom)sf
IPR035902 Nuc_phospho_transferase
IPR036566 PYNP-like_C_sf
IPR013102 PYNP_C
IPR017872 Pyrmidine_PPase_CS
IPR028579 Thym_Pase_Put
IPR013466 Thymidine/AMP_Pase
IPR000053 Thymidine/pyrmidine_PPase
PANTHERiPTHR10515 PTHR10515, 1 hit
PfamiView protein in Pfam
PF02885 Glycos_trans_3N, 1 hit
PF00591 Glycos_transf_3, 1 hit
PF07831 PYNP_C, 1 hit
PIRSFiPIRSF000478 TP_PyNP, 1 hit
SMARTiView protein in SMART
SM00941 PYNP_C, 1 hit
SUPFAMiSSF47648 SSF47648, 1 hit
SSF52418 SSF52418, 1 hit
SSF54680 SSF54680, 1 hit
TIGRFAMsiTIGR02645 ARCH_P_rylase, 1 hit
PROSITEiView protein in PROSITE
PS00647 THYMID_PHOSPHORYLASE, 1 hit

Sequencei

Sequence statusi: Complete.

Q07J10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPVDAARPQ LKIRQIHLDT GRENVAVISR HSKALRPEVF SGFSRVEIRR
60 70 80 90 100
GNQSMLATLL ITDDNAMVGP DDLGLAEPAF RRFGEAAGSL VSVTPASPPA
110 120 130 140 150
SLDAVRGKIQ GRTLTAPEIE AIVNDLARYR YSDMEIAAFL IGAARFMTSD
160 170 180 190 200
ELLALVSAMA SVGTQLRWDR PVVVDKHCIG GIPGNRTSMV LVPIVAAHGL
210 220 230 240 250
TIPKTSSRAI TSPAGTADTM EVLARVDVGV PEMKEIVAAC NGCLIWGGHV
260 270 280 290 300
NLSPADDILI SVERPLCLDT REQMVASIMS KKLAAGSTHL LVDLPLGPSA
310 320 330 340 350
KVISPIDAMR LRKLFEFVGD HFGIAVETIT TDGRQPIGNG IGPVLEAQDV
360 370 380 390 400
MAVLGNDPKA PADLREKSLR LAGHLLEYDP NLRGGSGYAR ARELLESGAA
410 420 430 440 450
LKQMQKIIDN QGPTNCRKDL GTLTTDIVAP RDGVVTGIDN LQLNRLARTA
460 470 480 490 500
GAPIDKGAGI KLFKKVGDRV EQGEPLYRIY AFDPSEQELA VSAAEESSGY
510
TVDGVHAFRE QVL
Length:513
Mass (Da):54,877
Last modified:October 31, 2006 - v1
Checksum:i01A9C95320EF54B3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000463 Genomic DNA Translation: ABJ08074.1
RefSeqiWP_011665534.1, NC_008435.1

Genome annotation databases

EnsemblBacteriaiABJ08074; ABJ08074; RPE_4149
KEGGirpe:RPE_4149

Similar proteinsi

Entry informationi

Entry nameiTYPH_RHOP5
AccessioniPrimary (citable) accession number: Q07J10
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 31, 2006
Last modified: March 28, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health