Q07HP4 (Q07HP4_RHOP5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agarase EMBL ABJ08540.1
EC=3.2.1.81 EMBL ABJ08540.1

Gene names

Ordered Locus Names:

RPE_4620

Organism

Rhodopseudomonas palustris (strain BisA53) [Complete proteome] [HAMAP]

Taxonomic identifier

316055 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	448 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABJ08540.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q07HP4 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 3872FA880F0C808D	FASTA	448	50,101
	10 20 30 40 50 60 MRRTRWGGLA DGQFEASGFF RVDQQDGIHW LVDPEGGRFL SKGVNNVRFD QDHIRNTDKI 70 80 90 100 110 120 PYAEACLAKY GSRNNWRAAA ADRLAGWHVN TIGCWSDEVV AGAGRVPLAM TPIVDLGASF 130 140 150 160 170 180 WLHRRGQRFP DVFDAGFEDH IQHRAKDLCT PRRNAPQLLG TFIDNELYWS PDWRGTDELL 190 200 210 220 230 240 TTFLNFPVRR AGRVTAITAL QQHYREFEQF NAVWRTPARS WEALHMLRQI EPPFVRTPPG 250 260 270 280 290 300 PLYEAEEARA NGLDRRRAAF AADCEAFAAV VADRYFETCV AAIKAADPNH LVLGSRFGAL 310 320 330 340 350 360 PHEGVVAAAG RHLDVISFNC YAFDPSPLID AYAVTGKPCM ITEFAFRGDD VGLPNSMGGG 370 380 390 400 410 420 PRVADQIERA ARFRHYARAA VSKPTLVGYH WFEHADQPRE GRFDGEDCNY GTVNIEDEVY 430 440 AELTDAISEV NAAAEWLHAG WDDAPPLG

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisA53." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y., Richardson P. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisA53.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000463 Genomic DNA. Translation: ABJ08540.1.
RefSeq	YP_783520.1. NC_008435.1.
3D structure databases
ProteinModelPortal	Q07HP4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q07HP4.
Protein family/group databases
CAZy	GH50. Glycoside Hydrolase Family 50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4362322.
GenomeReviews	Gene locus RPE_4620 in contig CP000463_GR.
KEGG	rpe:RPE_4620.
PATRIC	23263938. VBIRhoPal93214_4687.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG10914.
HOGENOM	HBG660148.
OMA	RFLSKGV.
ProtClustDB	CLSK819549.
Enzyme and pathway databases
BioCyc	RPAL316055:RPE_4620-MONOMER.
Family and domain databases
InterPro	IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01219.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q07HP4_RHOP5

Accession

Primary (citable) accession number: Q07HP4

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)