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Q07646

- MEST_MOUSE

UniProt

Q07646 - MEST_MOUSE

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Protein

Mesoderm-specific transcript protein

Gene
Mest, Peg1, 121a
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: UniProtKB-KW

GO - Biological processi

  1. regulation of lipid storage Source: UniProtKB
  2. response to retinoic acid Source: BHF-UCL
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Protein family/group databases

MEROPSiS33.972.

Names & Taxonomyi

Protein namesi
Recommended name:
Mesoderm-specific transcript protein (EC:3.-.-.-)
Alternative name(s):
Paternally-expressed gene 1 protein
Gene namesi
Name:Mest
Synonyms:Peg1
ORF Names:121a
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 6

Organism-specific databases

MGIiMGI:96968. Mest.

Subcellular locationi

Endoplasmic reticulum membrane; Multi-pass membrane protein 1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei13 – 3321Helical; Reviewed predictionAdd
BLAST
Transmembranei63 – 8321Helical; Reviewed predictionAdd
BLAST
Transmembranei266 – 28621Helical; Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. endoplasmic reticulum Source: UniProtKB
  2. endoplasmic reticulum membrane Source: UniProtKB-SubCell
  3. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 335335Mesoderm-specific transcript proteinPRO_0000284419Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi163 – 1631N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ07646.
PRIDEiQ07646.

Expressioni

Tissue specificityi

Expressed in mesodermal tissues. Isoform 1 is exclusively expressed from the paternal allele in all fetal tissues and cell lines examined, whereas isoform 2 is preferentially expressed from the paternal allele in a tissue-type-specific manner.1 Publication

Developmental stagei

Expressed in the nascent mesoderm of gastrulating embryos. At 7.0 dpc expression detected in both the intraembryonic mesoderm and the extraembryonic mesoderm cells of the amniotic fold. At 8.5 dpc expressed predominantly in the head mesenchyme, allantois, and the mesodermal layer of the amnion, chorion and yolk. In 9.5 dpc embryos highly expressed in the mesenchymal tissues, presomitic paraxial mesoderm, heart and branchial arches.1 Publication

Gene expression databases

ArrayExpressiQ07646.
BgeeiQ07646.
CleanExiMM_MEST.
GenevestigatoriQ07646.

Structurei

3D structure databases

ProteinModelPortaliQ07646.
SMRiQ07646. Positions 48-333.

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi98 – 1036RVIALD

Sequence similaritiesi

Belongs to the AB hydrolase superfamily.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0596.
GeneTreeiENSGT00510000047602.
HOGENOMiHOG000049677.
HOVERGENiHBG052816.
InParanoidiQ07646.
OMAiSVSIPIH.
PhylomeDBiQ07646.
TreeFamiTF329307.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR000639. Epox_hydrolase-like.
[Graphical view]
PRINTSiPR00412. EPOXHYDRLASE.
SUPFAMiSSF53474. SSF53474. 1 hit.

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q07646-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MVRRDRLRRM REWWVQVGLL AVPLLAAYLH IPPPQLSPAL HSWKTSGKFF    50
TYKGLRIFYQ DSVGVVGSPE IVVLLHGFPT SSYDWYKIWE GLTLRFHRVI 100
ALDFLGFGFS DKPRPHQYSI FEQASIVESL LRHLGLQNRR INLLSHDYGD 150
IVAQELLYRY KQNRSGRLTI KSLCLSNGGI FPETHRPLLL QKLLKDGGVL 200
SPILTRLMNF FVFSRGLTPV FGPYTRPTES ELWDMWAVIR NNDGNLVIDS 250
LLQYINQRKK FRRRWVGALA SVSIPIHFIY GPLDPINPYP EFLELYRKTL 300
PRSTVSILDD HISHYPQLED PMGFLNAYMG FINSF 335
Length:335
Mass (Da):38,907
Last modified:November 1, 1996 - v1
Checksum:iF5F394F46152E712
GO
Isoform 2 (identifier: Q07646-2) [UniParc]FASTAAdd to Basket

Also known as: MEST intronic transcript 1

The sequence of this isoform differs from the canonical sequence as follows:
     1-9: Missing.

Note: No experimental confirmation available.

Show »
Length:326
Mass (Da):37,668
Checksum:i1C4DD363B5D3421A
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 99Missing in isoform 2. VSP_024534

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti43 – 431W → C in BAC28891. 1 Publication
Sequence conflicti171 – 1711K → N in AAM78507. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D16262 mRNA. Translation: BAA03795.1.
AF482999 mRNA. Translation: AAM78507.1.
AK032881 mRNA. Translation: BAC28068.1.
AK034949 mRNA. Translation: BAC28891.1.
AK168714 mRNA. Translation: BAE40556.1.
AK168732 mRNA. Translation: BAE40573.1.
AK168743 mRNA. Translation: BAE40584.1.
AK168995 mRNA. Translation: BAE40794.1.
AK169095 mRNA. Translation: BAE40878.1.
AK169266 mRNA. Translation: BAE41027.1.
BC004019 mRNA. Translation: AAH04019.1.
BC006639 mRNA. Translation: AAH06639.1.
AF017994 Genomic DNA. Translation: AAC53396.1.
CCDSiCCDS19979.1. [Q07646-1]
RefSeqiNP_001239221.1. NM_001252292.1.
NP_001239222.1. NM_001252293.1. [Q07646-2]
NP_032616.1. NM_008590.2. [Q07646-1]
UniGeneiMm.335639.

Genome annotation databases

EnsembliENSMUST00000163949; ENSMUSP00000129639; ENSMUSG00000051855. [Q07646-1]
GeneIDi17294.
KEGGimmu:17294.
UCSCiuc009bfs.2. mouse. [Q07646-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D16262 mRNA. Translation: BAA03795.1 .
AF482999 mRNA. Translation: AAM78507.1 .
AK032881 mRNA. Translation: BAC28068.1 .
AK034949 mRNA. Translation: BAC28891.1 .
AK168714 mRNA. Translation: BAE40556.1 .
AK168732 mRNA. Translation: BAE40573.1 .
AK168743 mRNA. Translation: BAE40584.1 .
AK168995 mRNA. Translation: BAE40794.1 .
AK169095 mRNA. Translation: BAE40878.1 .
AK169266 mRNA. Translation: BAE41027.1 .
BC004019 mRNA. Translation: AAH04019.1 .
BC006639 mRNA. Translation: AAH06639.1 .
AF017994 Genomic DNA. Translation: AAC53396.1 .
CCDSi CCDS19979.1. [Q07646-1 ]
RefSeqi NP_001239221.1. NM_001252292.1.
NP_001239222.1. NM_001252293.1. [Q07646-2 ]
NP_032616.1. NM_008590.2. [Q07646-1 ]
UniGenei Mm.335639.

3D structure databases

ProteinModelPortali Q07646.
SMRi Q07646. Positions 48-333.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

MEROPSi S33.972.

Proteomic databases

PaxDbi Q07646.
PRIDEi Q07646.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000163949 ; ENSMUSP00000129639 ; ENSMUSG00000051855 . [Q07646-1 ]
GeneIDi 17294.
KEGGi mmu:17294.
UCSCi uc009bfs.2. mouse. [Q07646-1 ]

Organism-specific databases

CTDi 4232.
MGIi MGI:96968. Mest.

Phylogenomic databases

eggNOGi COG0596.
GeneTreei ENSGT00510000047602.
HOGENOMi HOG000049677.
HOVERGENi HBG052816.
InParanoidi Q07646.
OMAi SVSIPIH.
PhylomeDBi Q07646.
TreeFami TF329307.

Miscellaneous databases

ChiTaRSi MEST. mouse.
NextBioi 291822.
PROi Q07646.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q07646.
Bgeei Q07646.
CleanExi MM_MEST.
Genevestigatori Q07646.

Family and domain databases

Gene3Di 3.40.50.1820. 1 hit.
InterProi IPR029058. AB_hydrolase.
IPR000639. Epox_hydrolase-like.
[Graphical view ]
PRINTSi PR00412. EPOXHYDRLASE.
SUPFAMi SSF53474. SSF53474. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A novel mesoderm-specific cDNA isolated from a mouse embryonal carcinoma cell line."
    Sado T., Nakajima N., Tada M., Takagi N.
    Dev. Growth Differ. 35:551-560(1993)
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), DEVELOPMENTAL STAGE.
  2. "Identification and characterization of an imprinted antisense RNA (MESTIT1) in the human MEST locus on chromosome 7q32."
    Nakabayashi K., Bentley L., Hitchins M.P., Mitsuya K., Meguro M., Minagawa S., Bamforth J.S., Stanier P., Preece M., Weksberg R., Oshimura M., Moore G.E., Scherer S.W.
    Hum. Mol. Genet. 11:1743-1756(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), ALTERNATIVE SPLICING.
    Strain: C57BL/6J.
  3. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Strain: C57BL/6J.
    Tissue: Amnion, Embryo, Heart, Kidney and Wolffian duct.
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Strain: Czech II.
    Tissue: Mammary tumor.
  5. "Genomic structure and parent-of-origin-specific methylation of Peg1."
    Lefebvre L., Viville S., Barton S.C., Ishino F., Surani M.A.
    Hum. Mol. Genet. 6:1907-1915(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-60.
    Strain: 129/Sv.
  6. "Peg1/Mest imprinted gene on chromosome 6 identified by cDNA subtraction hybridization."
    Kaneko-Ishino T., Kuroiwa Y., Miyoshi N., Kohda T., Suzuki R., Yokoyama M., Viville S., Barton S.C., Ishino F., Surani M.A.
    Nat. Genet. 11:52-59(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION, TISSUE SPECIFICITY.
    Strain: 129/Sv.
  7. "Mesoderm-specific transcript is associated with fat mass expansion in response to a positive energy balance."
    Nikonova L., Koza R.A., Mendoza T., Chao P.-M., Curley J.P., Kozak L.P.
    FASEB J. 22:3925-3937(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION.

Entry informationi

Entry nameiMEST_MOUSE
AccessioniPrimary (citable) accession number: Q07646
Secondary accession number(s): Q792T8
, Q8BS88, Q8K463, Q99KT5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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