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Protein

Protein SNA4

Gene

SNA4

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 6780 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciYEAST:G3O-29522-MONOMER.

Protein family/group databases

TCDBi9.B.12.3.2. the sensitivity to sodium or salt stress-induced hydrophobic peptide (sna) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein SNA4
Gene namesi
Name:SNA4
Ordered Locus Names:YDL123W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome IV

Organism-specific databases

EuPathDBiFungiDB:YDL123W.
SGDiS000002281. SNA4.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 8CytoplasmicSequence analysis8
Transmembranei9 – 29HelicalSequence analysisAdd BLAST21
Topological domaini30 – 41VacuolarSequence analysisAdd BLAST12
Transmembranei42 – 62HelicalSequence analysisAdd BLAST21
Topological domaini63 – 140CytoplasmicSequence analysisAdd BLAST78

GO - Cellular componenti

  • fungal-type vacuole lumen Source: SGD
  • fungal-type vacuole membrane Source: SGD
  • integral component of membrane Source: UniProtKB-KW

Keywords - Cellular componenti

Membrane, Vacuole

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001939881 – 140Protein SNA4Add BLAST140

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi2S-palmitoyl cysteine1 Publication1
Lipidationi3S-palmitoyl cysteine1 Publication1
Lipidationi5S-palmitoyl cysteine1 Publication1
Lipidationi7S-palmitoyl cysteine1 Publication1
Lipidationi8S-palmitoyl cysteine1 Publication1
Cross-linki128Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)Combined sources
Modified residuei134PhosphoserineCombined sources1

Keywords - PTMi

Isopeptide bond, Lipoprotein, Palmitate, Phosphoprotein, Ubl conjugation

Proteomic databases

PRIDEiQ07549.

PTM databases

iPTMnetiQ07549.
SwissPalmiQ07549.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
RSP5P399402EBI-22078,EBI-16219

GO - Molecular functioni

Protein-protein interaction databases

BioGridi31940. 40 interactors.
DIPiDIP-2816N.
IntActiQ07549. 18 interactors.
MINTiMINT-543058.
STRINGi4932.YDL123W.

Structurei

3D structure databases

ProteinModelPortaliQ07549.
SMRiQ07549.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0057 (PMP3) family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000175185.
InParanoidiQ07549.
OMAiQGSSARN.
OrthoDBiEOG092C5YWZ.

Family and domain databases

InterProiView protein in InterPro
IPR000612. PMP3.
PANTHERiPTHR21659. PTHR21659. 1 hit.
PfamiView protein in Pfam
PF01679. Pmp3. 1 hit.
PROSITEiView protein in PROSITE
PS01309. UPF0057. 1 hit.

Sequencei

Sequence statusi: Complete.

Q07549-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCCYCVCCTV SDFILYIVAF FFPPAAVLLR SGPCSSDFLL NVLLTLLGFL
60 70 80 90 100
PGMLHAFYYI TITSPLRNAE YVYYYQQGWV DSERNVPSNR PQNSQTPQNR
110 120 130 140
PQQGSSARNV YPSVETPLLQ GAAPHDNKQS LVESPPPYVP
Length:140
Mass (Da):15,673
Last modified:November 1, 1996 - v1
Checksum:i3B9378FD5EDDFA5A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z74171 Genomic DNA. Translation: CAA98691.1.
AY558162 Genomic DNA. Translation: AAS56488.1.
BK006938 Genomic DNA. Translation: DAA11737.1.
PIRiS67666.
RefSeqiNP_010160.1. NM_001180182.1.

Genome annotation databases

EnsemblFungiiYDL123W; YDL123W; YDL123W.
GeneIDi851434.
KEGGisce:YDL123W.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiSNA4_YEAST
AccessioniPrimary (citable) accession number: Q07549
Secondary accession number(s): D6VRM7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: July 5, 2017
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome IV
    Yeast (Saccharomyces cerevisiae) chromosome IV: entries and gene names