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Q07524 (Q07524_TROMA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length295 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
Q07524 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 789A901E63D18CEB

FASTA29533,516
        10         20         30         40         50         60 
MPPNILSIFL HLLPILMFSS SCLGQGPPSP GYYPSSQITS LGFDQGYTNL WGPQHQRVDQ 

        70         80         90        100        110        120 
GSLTIWLDST SGSGFKSINR YRSGYFGANI KLQSGYTAGV ITSFYLSNNQ DYPGKHDEID 

       130        140        150        160        170        180 
IEFLGTIPGK PYTLQTNVFI EGSGDYNIIG REMRIHLWFD PTQDYHNYAI YWTPSEIIFF 

       190        200        210        220        230        240 
VDDVPIRRYP RKSDATFPLR PLWVYGSVWD ASSWATENGK YKADYRYQPF VGKYEDFKLG 

       250        260        270        280        290 
SCTVEAASSC NPASVSPYGQ LSQQQVAAME WVQKNYMVYN YCDDPTRDHT LTPEC 

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References

[1]"Molecular characterisation of a xyloglucan specific endo 1,4 beta D glucanase (xyloglucan endo-transglycosylase) from nasturtium seeds."
De Silva J., Jarman C.D., Arrowsmith D.A., Stronach M.S., Sidebottom C., Reid J.S.G.
Plant J. 3:701-711(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Cotyledon EMBL CAA48324.1.
[2]"Structural evidence for the evolution of xyloglucanase activity from xyloglucan endo-transglycosylases: biological implications for cell wall metabolism."
Baumann M.J., Eklof J.M., Michel G., Kallas A.M., Teeri T.T., Czjzek M., Brumer H.
Plant Cell 19:1947-1963(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 25-295.
[3]"Analysis of nasturtium TmNXG1 complexes by crystallography and molecular dynamics provides detailed insight into substrate recognition by family GH16 xyloglucan endo-transglycosylases and endo-hydrolases."
Mark P., Baumann M.J., Eklof J.M., Gullfot F., Michel G., Kallas A.M., Teeri T.T., Brumer H., Czjzek M.
Proteins 75:820-836(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X68254 mRNA. Translation: CAA48324.1.
PIRS48102.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2UWAX-ray1.80A/B/C25-295[»]
2UWBX-ray2.00A/B25-295[»]
2UWCX-ray2.30A/B25-295[»]
2VH9X-ray2.10A/B1-295[»]
ProteinModelPortalQ07524.
SMRQ07524. Positions 25-295.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH16. Glycoside Hydrolase Family 16.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR000757. Glyco_hydro_16.
IPR016455. XET.
IPR010713. XET_C.
[Graphical view]
PfamPF00722. Glyco_hydro_16. 1 hit.
PF06955. XET_C. 1 hit.
[Graphical view]
PIRSFPIRSF005604. XET. 1 hit.
SUPFAMSSF49899. SSF49899. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ07524.

Entry information

Entry nameQ07524_TROMA
AccessionPrimary (citable) accession number: Q07524
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 19, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)