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Protein

Peroxisomal membrane protein 2

Gene

Pxmp2

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Names & Taxonomyi

Protein namesi
Recommended name:
Peroxisomal membrane protein 2
Alternative name(s):
22 kDa peroxisomal membrane protein
Gene namesi
Name:Pxmp2
Synonyms:Pmp22
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi61812. Pxmp2.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini2 – 30CytoplasmicSequence analysisAdd BLAST29
Transmembranei31 – 51HelicalSequence analysisAdd BLAST21
Topological domaini52 – 74PeroxisomalSequence analysisAdd BLAST23
Transmembranei75 – 95HelicalSequence analysisAdd BLAST21
Topological domaini96 – 113CytoplasmicSequence analysisAdd BLAST18
Transmembranei114 – 134HelicalSequence analysisAdd BLAST21
Topological domaini135 – 172PeroxisomalSequence analysisAdd BLAST38
Transmembranei173 – 193HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

  • integral component of peroxisomal membrane Source: RGD
  • peroxisomal membrane Source: UniProtKB
  • peroxisome Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Membrane, Peroxisome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00002189312 – 194Peroxisomal membrane protein 2Add BLAST193

Proteomic databases

PaxDbiQ07066.
PRIDEiQ07066.

Interactioni

Subunit structurei

Interacts with PEX19 and SIVA1.By similarity

Protein-protein interaction databases

BioGridi248168. 1 interactor.
STRINGi10116.ENSRNOP00000053518.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1944. Eukaryota.
ENOG4111SYH. LUCA.
HOGENOMiHOG000008014.
HOVERGENiHBG052506.
InParanoidiQ07066.
KOiK13347.
PhylomeDBiQ07066.

Family and domain databases

InterProiIPR007248. Mpv17_PMP22.
[Graphical view]
PANTHERiPTHR11266. PTHR11266. 1 hit.
PfamiPF04117. Mpv17_PMP22. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q07066-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPAASRLRV ESELRSLPKR ALAQYLLFLK FYPVVTKAVS SGILSALGNL
60 70 80 90 100
LAQMIEKKQK KDSRSLEVSG LLRYLVYGLF VTGPLSHYLY LFMEYWVPPE
110 120 130 140 150
VPWARVKRLL LDRLFFAPTF LLLFFFVMNL LEGKNISVFV AKMRSGFWPA
160 170 180 190
LQMNWRMWTP LQFININYVP LQFRVLFANM AALFWYAYLA SLGK
Length:194
Mass (Da):22,577
Last modified:January 23, 2007 - v2
Checksum:i4BEDB2CEBE52EAAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X70223 mRNA. Translation: CAA49756.1.
PIRiS28850.
RefSeqiNP_113775.1. NM_031587.1.
UniGeneiRn.10292.

Genome annotation databases

GeneIDi29533.
KEGGirno:29533.
UCSCiRGD:61812. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X70223 mRNA. Translation: CAA49756.1.
PIRiS28850.
RefSeqiNP_113775.1. NM_031587.1.
UniGeneiRn.10292.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi248168. 1 interactor.
STRINGi10116.ENSRNOP00000053518.

Proteomic databases

PaxDbiQ07066.
PRIDEiQ07066.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi29533.
KEGGirno:29533.
UCSCiRGD:61812. rat.

Organism-specific databases

CTDi5827.
RGDi61812. Pxmp2.

Phylogenomic databases

eggNOGiKOG1944. Eukaryota.
ENOG4111SYH. LUCA.
HOGENOMiHOG000008014.
HOVERGENiHBG052506.
InParanoidiQ07066.
KOiK13347.
PhylomeDBiQ07066.

Miscellaneous databases

PROiQ07066.

Family and domain databases

InterProiIPR007248. Mpv17_PMP22.
[Graphical view]
PANTHERiPTHR11266. PTHR11266. 1 hit.
PfamiPF04117. Mpv17_PMP22. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPXMP2_RAT
AccessioniPrimary (citable) accession number: Q07066
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: January 23, 2007
Last modified: June 8, 2016
This is version 94 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.