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Protein

30S ribosomal protein S12, chloroplastic

Gene

rps12

Organism
Stigeoclonium helveticum (Green alga)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12, chloroplastic
Gene namesi
Name:rps12
Encoded oniPlastid; Chloroplast
OrganismiStigeoclonium helveticum (Green alga)
Taxonomic identifieri55999 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChaetophoralesChaetophorales incertae sedisStigeoclonium

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002766341 – 13130S ribosomal protein S12, chloroplasticAdd BLAST131

Proteomic databases

PRIDEiQ06SG4.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.By similarity

Structurei

3D structure databases

ProteinModelPortaliQ06SG4.
SMRiQ06SG4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

CDDicd03368. Ribosomal_S12. 1 hit.
HAMAPiMF_00403_B. Ribosomal_S12_B. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR005679. Ribosomal_S12_bac.
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiView protein in Pfam
PF00164. Ribosom_S12_S23. 1 hit.
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
PRINTSiPR01034. RIBOSOMALS12.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00981. rpsL_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00055. RIBOSOMAL_S12. 1 hit.

Sequencei

Sequence statusi: Complete.

Q06SG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTIQQLVKS ARQKLVNKTK APALKSCPQR RGICLRVYTV TPKKPNSALR
60 70 80 90 100
KVARVRLSSG FEVTAYIPGI GHNLQEHAVV LVRGGRVKDL PGVRYHIVRG
110 120 130
TLDTAGVKGR VQGRSKYGVK KVSAKSAGKS K
Length:131
Mass (Da):14,254
Last modified:October 31, 2006 - v1
Checksum:i1C93F60FE7478272
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ630521 Genomic DNA. Translation: ABF60192.1.
RefSeqiYP_764402.1. NC_008372.1.

Genome annotation databases

GeneIDi4308372.

Similar proteinsi

Entry informationi

Entry nameiRR12_STIHE
AccessioniPrimary (citable) accession number: Q06SG4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: October 31, 2006
Last modified: April 12, 2017
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families