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Q06965

- HEM0_RHOS4

UniProt

Q06965 - HEM0_RHOS4

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Protein
5-aminolevulinate synthase 2
Gene
hemT, RHOS4_30750, RSP_3028
Organism
Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2.

Cofactori

Pyridoxal phosphate.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei21 – 211Substrate By similarity
Binding sitei137 – 1371Substrate By similarity
Binding sitei189 – 1891Pyridoxal phosphate By similarity
Binding sitei217 – 2171Pyridoxal phosphate By similarity
Binding sitei245 – 2451Pyridoxal phosphate By similarity
Active sitei248 – 2481 By similarity
Binding sitei277 – 2771Pyridoxal phosphate By similarity
Binding sitei278 – 2781Pyridoxal phosphate By similarity
Binding sitei363 – 3631Substrate By similarity

GO - Molecular functioni

  1. 5-aminolevulinate synthase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. protoporphyrinogen IX biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Acyltransferase, Transferase

Keywords - Biological processi

Heme biosynthesis

Keywords - Ligandi

Pyridoxal phosphate

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-13234.
RSPH272943:GJAS-3162-MONOMER.
UniPathwayiUPA00251; UER00375.

Names & Taxonomyi

Protein namesi
Recommended name:
5-aminolevulinate synthase 2 (EC:2.3.1.37)
Alternative name(s):
5-aminolevulinic acid synthase
Delta-ALA synthase
Delta-aminolevulinate synthase
Gene namesi
Name:hemT
Ordered Locus Names:RHOS4_30750
ORF Names:RSP_3028
OrganismiRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Taxonomic identifieri272943 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
ProteomesiUP000002703: Chromosome 2

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 4074075-aminolevulinate synthase 2
PRO_0000163830Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei248 – 2481N6-(pyridoxal phosphate)lysine By similarity

Interactioni

Protein-protein interaction databases

STRINGi272943.RSP_3028.

Structurei

3D structure databases

ProteinModelPortaliQ06965.
SMRiQ06965. Positions 2-393.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0156.
HOGENOMiHOG000221020.
KOiK00643.
OMAiLCRSISE.
OrthoDBiEOG6Q8HZD.
PhylomeDBiQ06965.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR010961. 4pyrrol_synth_NH2levulA_synth.
IPR001917. Aminotrans_II_pyridoxalP_BS.
IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01821. 5aminolev_synth. 1 hit.
PROSITEiPS00599. AA_TRANSFER_CLASS_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q06965-1 [UniParc]FASTAAdd to Basket

« Hide

MEFSQHFQKL IDDMRLDGRY RTFAELERIA GEFPTALWHG PDGQARRVTV    50
WCSNDYLGMG QNAEVLAAMH RSIDLSGAGT GGTRNISGTN RQHVALEAEL 100
ADLHGKESAL IFTSGWISNL AALGTLGKIL PECAIFSDAL NHNSMIEGIR 150
RSGAERFIFH HNDPVHLDRL LSSVDPARPK IVAFESVYSM DGDIAPIAEI 200
CDVAERHGAL TYLDEVHAVG LYGPRGGGIS DRDGLADRVT IIEGTLAKAF 250
GVMGGYVSGP SLLMDVIRSM SDSFIFTTSI CPHLAAGALA AVRHVKAHPD 300
ERRRQAENAV RLKVLLQKAG LPVLDTPSHI LPVMVGEAHL CRSISEALLA 350
RHAIYVQPIN YPTVARGQER FRLTPTPFHT TSHMEALVEA LLAVGRDLGW 400
AMSRRAA 407
Length:407
Mass (Da):44,333
Last modified:October 1, 1996 - v1
Checksum:i4772E3EC1DA55D82
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L07489 Genomic DNA. Translation: AAA26124.1.
CP000144 Genomic DNA. Translation: ABA80643.1.
PIRiA49845.
RefSeqiWP_011338981.1. NZ_AKVW01000002.1.
YP_354544.1. NC_007494.2.

Genome annotation databases

EnsemblBacteriaiABA80643; ABA80643; RSP_3028.
GeneIDi3721613.
KEGGirsp:RSP_3028.
PATRICi23156193. VBIRhoSph57909_3445.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L07489 Genomic DNA. Translation: AAA26124.1 .
CP000144 Genomic DNA. Translation: ABA80643.1 .
PIRi A49845.
RefSeqi WP_011338981.1. NZ_AKVW01000002.1.
YP_354544.1. NC_007494.2.

3D structure databases

ProteinModelPortali Q06965.
SMRi Q06965. Positions 2-393.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272943.RSP_3028.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA80643 ; ABA80643 ; RSP_3028 .
GeneIDi 3721613.
KEGGi rsp:RSP_3028.
PATRICi 23156193. VBIRhoSph57909_3445.

Phylogenomic databases

eggNOGi COG0156.
HOGENOMi HOG000221020.
KOi K00643.
OMAi LCRSISE.
OrthoDBi EOG6Q8HZD.
PhylomeDBi Q06965.

Enzyme and pathway databases

UniPathwayi UPA00251 ; UER00375 .
BioCyci MetaCyc:MONOMER-13234.
RSPH272943:GJAS-3162-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR010961. 4pyrrol_synth_NH2levulA_synth.
IPR001917. Aminotrans_II_pyridoxalP_BS.
IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01821. 5aminolev_synth. 1 hit.
PROSITEi PS00599. AA_TRANSFER_CLASS_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Expression of the Rhodobacter sphaeroides hemA and hemT genes, encoding two 5-aminolevulinic acid synthase isozymes."
    Neidle E.L., Kaplan S.
    J. Bacteriol. 175:2292-2303(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Complete sequence of chromosome 2 of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158.

Entry informationi

Entry nameiHEM0_RHOS4
AccessioniPrimary (citable) accession number: Q06965
Secondary accession number(s): Q3IXU1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: September 3, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Expressed in the mutant strain HemA1 but expression in the wild-type strain has not been proven.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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