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Q06951

- RFBB_VIBCH

UniProt

Q06951 - RFBB_VIBCH

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Protein

Phosphomannomutase

Gene
rfbB, VC_0242
Organism
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides.

Catalytic activityi

Alpha-D-mannose 1-phosphate = D-mannose 6-phosphate.

Cofactori

Binds 1 magnesium ion per subunit By similarity.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei103 – 1031Phosphoserine intermediate By similarity
Metal bindingi103 – 1031Magnesium; via phosphate group By similarity
Metal bindingi248 – 2481Magnesium By similarity
Metal bindingi250 – 2501Magnesium By similarity
Metal bindingi252 – 2521Magnesium By similarity

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. phosphomannomutase activity Source: TIGR

GO - Biological processi

  1. carbohydrate metabolic process Source: TIGR
  2. GDP-mannose biosynthetic process Source: UniProtKB-UniPathway
  3. O antigen biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Lipopolysaccharide biosynthesis

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciVCHO:VC0242-MONOMER.
UniPathwayiUPA00126; UER00424.
UPA00281.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphomannomutase (EC:5.4.2.8)
Short name:
PMM
Gene namesi
Name:rfbB
Ordered Locus Names:VC_0242
OrganismiVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Taxonomic identifieri243277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000000584: Chromosome 1

Subcellular locationi

Cell membrane Inferred

GO - Cellular componenti

  1. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 463463PhosphomannomutasePRO_0000147827Add
BLAST

Keywords - PTMi

Phosphoprotein

Interactioni

Protein-protein interaction databases

STRINGi243277.VC0242.

Structurei

3D structure databases

ProteinModelPortaliQ06951.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1109.
KOiK01840.
OMAiVVGCDIR.
OrthoDBiEOG6W9X55.

Family and domain databases

Gene3Di3.30.310.50. 1 hit.
3.40.120.10. 3 hits.
InterProiIPR005844. A-D-PHexomutase_a/b/a-I.
IPR016055. A-D-PHexomutase_a/b/a-I/II/III.
IPR005845. A-D-PHexomutase_a/b/a-II.
IPR005846. A-D-PHexomutase_a/b/a-III.
IPR005843. A-D-PHexomutase_C.
IPR016066. A-D-PHexomutase_CS.
IPR005841. Alpha-D-phosphohexomutase_SF.
[Graphical view]
PfamiPF02878. PGM_PMM_I. 1 hit.
PF02879. PGM_PMM_II. 1 hit.
PF02880. PGM_PMM_III. 1 hit.
PF00408. PGM_PMM_IV. 1 hit.
[Graphical view]
PRINTSiPR00509. PGMPMM.
SUPFAMiSSF53738. SSF53738. 3 hits.
SSF55957. SSF55957. 1 hit.
PROSITEiPS00710. PGM_PMM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q06951-1 [UniParc]FASTAAdd to Basket

« Hide

MKELTCFKAY DIRGQLGSEL DNEIAYRIGR SYGQFLKSEN DADKTVVVGG    50
DVRLTSEALK QALANGLMDA GINVIDIGVT GTEEIYFATF YLGVDGGIEV 100
TASHNPMDYN GMKLVREGSK PISGDTGLRE IQALAEKNEF MDVEVKGNYK 150
KVSLLPEYVD HLISYITPAK IKPMKLVINS GNGAAGHVID ELEKRFIELS 200
IPLEIIKVHH EEDGNFPNGI PNPLLPECRA DTANAVKEHK ADMGIAFDGD 250
FDRCFLFDEN GDFIEGYYIV GLLAEAFLQK EQGAKIIHDP RLSWNTIDVV 300
TKSGGVPVMS KTGHAFIKER MRKEDAIYGG EMSAHHYFRD FGYCDSGMIP 350
WLLITELLSL APDISLSKLI SAKRFLFPCS GEINFKVKQA KLIMEQVYLH 400
YYENSIHFSA IDGISLEFEG WRFNLRDSNT EPLLRLNVES KQNIALMNDK 450
VEELTKLIKK LDI 463
Length:463
Mass (Da):51,838
Last modified:February 1, 1995 - v1
Checksum:i7212EA3A64BFC6BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X59554 Genomic DNA. Translation: CAA42135.1.
AE003852 Genomic DNA. Translation: AAF93418.1.
PIRiS28469.
RefSeqiNP_229899.1. NC_002505.1.
WP_000661577.1. NC_002505.1.

Genome annotation databases

EnsemblBacteriaiAAF93418; AAF93418; VC_0242.
GeneIDi2614705.
KEGGivch:VC0242.
PATRICi20079528. VBIVibCho83274_0223.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X59554 Genomic DNA. Translation: CAA42135.1 .
AE003852 Genomic DNA. Translation: AAF93418.1 .
PIRi S28469.
RefSeqi NP_229899.1. NC_002505.1.
WP_000661577.1. NC_002505.1.

3D structure databases

ProteinModelPortali Q06951.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243277.VC0242.

Protocols and materials databases

DNASUi 2614705.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAF93418 ; AAF93418 ; VC_0242 .
GeneIDi 2614705.
KEGGi vch:VC0242.
PATRICi 20079528. VBIVibCho83274_0223.

Phylogenomic databases

eggNOGi COG1109.
KOi K01840.
OMAi VVGCDIR.
OrthoDBi EOG6W9X55.

Enzyme and pathway databases

UniPathwayi UPA00126 ; UER00424 .
UPA00281 .
BioCyci VCHO:VC0242-MONOMER.

Family and domain databases

Gene3Di 3.30.310.50. 1 hit.
3.40.120.10. 3 hits.
InterProi IPR005844. A-D-PHexomutase_a/b/a-I.
IPR016055. A-D-PHexomutase_a/b/a-I/II/III.
IPR005845. A-D-PHexomutase_a/b/a-II.
IPR005846. A-D-PHexomutase_a/b/a-III.
IPR005843. A-D-PHexomutase_C.
IPR016066. A-D-PHexomutase_CS.
IPR005841. Alpha-D-phosphohexomutase_SF.
[Graphical view ]
Pfami PF02878. PGM_PMM_I. 1 hit.
PF02879. PGM_PMM_II. 1 hit.
PF02880. PGM_PMM_III. 1 hit.
PF00408. PGM_PMM_IV. 1 hit.
[Graphical view ]
PRINTSi PR00509. PGMPMM.
SUPFAMi SSF53738. SSF53738. 3 hits.
SSF55957. SSF55957. 1 hit.
PROSITEi PS00710. PGM_PMM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: El Tor O17 / Serotype O1.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39315 / El Tor Inaba N16961.

Entry informationi

Entry nameiRFBB_VIBCH
AccessioniPrimary (citable) accession number: Q06951
Secondary accession number(s): Q9JQ14
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: September 3, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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