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Protein

Probable glucan endo-1,3-beta-glucosidase A6

Gene

A6

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at transcript leveli

Functioni

Probable beta-1,3-glucanase that may be involved in the degradation of callose walls around the microspore tetrad during pollen development (Probable). May be required for pollen exine formation (PubMed:21849515).1 Publication1 Publication

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei280NucleophileBy similarity1
Active sitei345Proton donorCurated1

GO - Molecular functioni

GO - Biological processi

  • carbohydrate metabolic process Source: InterPro
  • defense response Source: UniProtKB-KW
  • embryo development ending in seed dormancy Source: TAIR
  • pollen exine formation Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Plant defense

Enzyme and pathway databases

BioCyciARA:AT4G14080-MONOMER.

Protein family/group databases

CAZyiCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable glucan endo-1,3-beta-glucosidase A6 (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase
Short name:
(1->3)-beta-glucanase
Anther-specific protein A6
Beta-1,3-endoglucanase
Protein MATERNAL EFFECT EMBRYO ARREST 481 Publication
Gene namesi
Name:A61 Publication
Synonyms:MEE481 Publication
Ordered Locus Names:At4g14080
ORF Names:dl3080c
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G14080.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Disruption phenotypei

Embryonic lethality due to division arrested at one-cell zygotic stage.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_000001188321 – 478Probable glucan endo-1,3-beta-glucosidase A6Add BLAST458

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi390 ↔ 453By similarity

Post-translational modificationi

Contains two additional disulfide bonds, but it is unclear if they are between the pairs Cys-409-Cys-416 and Cys-425-Cys-471 or between the pairs Cys-409-Cys-471 and Cys-416-Cys-425.By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiQ06915.
PRIDEiQ06915.

Expressioni

Tissue specificityi

Anthers.1 Publication

Gene expression databases

GenevisibleiQ06915. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G14080.1.

Structurei

3D structure databases

ProteinModelPortaliQ06915.
SMRiQ06915.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IV95. Eukaryota.
ENOG41113FY. LUCA.
HOGENOMiHOG000238220.
InParanoidiQ06915.
OMAiLRMACAQ.
OrthoDBiEOG09360BAO.
PhylomeDBiQ06915.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTiSM00768. X8. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q06915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLLAFFLFT ILVFSSSCCS ATRFQGHRYM QRKTMLDLAS KIGINYGRRG
60 70 80 90 100
NNLPSPYQSI NFIKSIKAGH VKLYDADPES LTLLSQTNLY VTITVPNHQI
110 120 130 140 150
TALSSNQTIA DEWVRTNILP YYPQTQIRFV LVGNEILSYN SGNVSVNLVP
160 170 180 190 200
AMRKIVNSLR LHGIHNIKVG TPLAMDSLRS SFPPSNGTFR EEITGPVMLP
210 220 230 240 250
LLKFLNGTNS YFFLNVHPYF RWSRNPMNTS LDFALFQGHS TYTDPQTGLV
260 270 280 290 300
YRNLLDQMLD SVLFAMTKLG YPHMRLAISE TGWPNFGDID ETGANILNAA
310 320 330 340 350
TYNRNLIKKM SASPPIGTPS RPGLPIPTFV FSLFNENQKS GSGTQRHWGI
360 370 380 390 400
LHPDGSPIYD VDFTGQTPLT GFNPLPKPTN NVPYKGQVWC VPVEGANETE
410 420 430 440 450
LEETLRMACA QSNTTCAALA PGRECYEPVS IYWHASYALN SYWAQFRNQS
460 470
IQCFFNGLAH ETTTNPGNDR CKFPSVTL
Length:478
Mass (Da):53,472
Last modified:November 1, 1995 - v1
Checksum:i68EAE92974E8FA05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X70409 Genomic DNA. Translation: CAA49853.1.
Z97335 Genomic DNA. Translation: CAB10187.1.
AL161538 Genomic DNA. Translation: CAB78450.1.
CP002687 Genomic DNA. Translation: AEE83368.1.
AY099580 mRNA. Translation: AAM20432.1.
BT002150 mRNA. Translation: AAN72161.1.
PIRiS31906.
RefSeqiNP_193144.1. NM_117483.4.
UniGeneiAt.162.

Genome annotation databases

EnsemblPlantsiAT4G14080.1; AT4G14080.1; AT4G14080.
GeneIDi827044.
GrameneiAT4G14080.1; AT4G14080.1; AT4G14080.
KEGGiath:AT4G14080.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X70409 Genomic DNA. Translation: CAA49853.1.
Z97335 Genomic DNA. Translation: CAB10187.1.
AL161538 Genomic DNA. Translation: CAB78450.1.
CP002687 Genomic DNA. Translation: AEE83368.1.
AY099580 mRNA. Translation: AAM20432.1.
BT002150 mRNA. Translation: AAN72161.1.
PIRiS31906.
RefSeqiNP_193144.1. NM_117483.4.
UniGeneiAt.162.

3D structure databases

ProteinModelPortaliQ06915.
SMRiQ06915.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G14080.1.

Protein family/group databases

CAZyiCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Proteomic databases

PaxDbiQ06915.
PRIDEiQ06915.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G14080.1; AT4G14080.1; AT4G14080.
GeneIDi827044.
GrameneiAT4G14080.1; AT4G14080.1; AT4G14080.
KEGGiath:AT4G14080.

Organism-specific databases

TAIRiAT4G14080.

Phylogenomic databases

eggNOGiENOG410IV95. Eukaryota.
ENOG41113FY. LUCA.
HOGENOMiHOG000238220.
InParanoidiQ06915.
OMAiLRMACAQ.
OrthoDBiEOG09360BAO.
PhylomeDBiQ06915.

Enzyme and pathway databases

BioCyciARA:AT4G14080-MONOMER.

Miscellaneous databases

PROiQ06915.

Gene expression databases

GenevisibleiQ06915. AT.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTiSM00768. X8. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiEA6_ARATH
AccessioniPrimary (citable) accession number: Q06915
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: November 2, 2016
This is version 118 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.