Q06609 (RAD51_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 137.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: DNA repair protein RAD51 homolog 1 Short name=HsRAD51 Short name=hRAD51 Alternative name(s): RAD51 homolog A | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 339 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May participate in a common DNA damage response pathway associated with the activation of homologous recombination and double-strand break repair. Binds to single and double stranded DNA and exhibits DNA-dependent ATPase activity. Underwinds duplex DNA and forms helical nucleoprotein filaments. Plays a role in regulating mitochondrial DNA copy number under conditions of oxidative stress in the presence of RAD51C and XRCC3. Ref.5 Ref.18 Ref.26 |
| Subunit structure | Interacts with BRCA1, BRCA2 and either directly or indirectly with p53. Interacts with XRCC3, RAD54L and RAD54B. Part of a complex with RAD51C and RAD51B. Interacts with RAD51AP1 and RAD51AP2. Interacts with CHEK1, and this may require prior phosphorylation of CHEK1. Interacts with the MND1-PSMC3IP heterodimer By similarity. Interacts with OBFC2B. Interacts with RPA1, PALB2 and RAD51. Interacts with SWI5/C9orf119, and at lower level with SFR1/MEIR5. Interacts with hyperphosphorylated RPA2; this interaction is necessary for efficient recruitment to chromatin in response to DNA damage. Interacts with SWSAP1; involved in homologous recombination repair. Ref.13 Ref.14 Ref.15 Ref.16 Ref.17 Ref.19 Ref.22 Ref.23 Ref.24 Ref.27 Ref.28 Ref.29 Ref.30 |
| Subcellular location | Nucleus. Cytoplasm. Cytoplasm › perinuclear region. Mitochondrion matrix. Note: Colocalizes with RAD51AP1 and RPA2 to multiple nuclear foci upon induction of DNA damage. DNA damage induces an increase in nuclear levels. Ref.5 Ref.15 Ref.21 Ref.22 Ref.25 Ref.26 Ref.28 |
| Tissue specificity | Highly expressed in testis and thymus, followed by small intestine, placenta, colon, pancreas and ovary. Weakly expressed in breast. Ref.5 |
| Induction | Stress-induced increase in the mitochondrial levels is seen. Ref.26 |
| Domain | The nuclear localization may reside in the C-terminus (between 259 and 339 AA). |
| Post-translational modification | Phosphorylated. Phosphorylation of Thr-309 by CHEK1 may enhance association with chromatin at sites of DNA damage and promote DNA repair by homologous recombination. Phosphorylation by ABL1 inhibits function. Ref.16 Ref.22 |
| Involvement in disease | Defects in RAD51 are a cause of susceptibility to breast cancer (BC) [MIM:114480]. A common malignancy originating from breast epithelial tissue. Breast neoplasms can be distinguished by their histologic pattern. Invasive ductal carcinoma is by far the most common type. Breast cancer is etiologically and genetically heterogeneous. Important genetic factors have been indicated by familial occurrence and bilateral involvement. Mutations at more than one locus can be involved in different families or even in the same case. Ref.33 |
| Sequence similarities | Belongs to the RecA family. RAD51 subfamily. Contains 1 HhH domain. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| itself | 3 | EBI-297202,EBI-297202 | ||
| BRCA2 | P51587 | 19 | EBI-297202,EBI-79792 | |
| CHEK1 | O14757 | 3 | EBI-297202,EBI-974488 | |
| RAD51AP1 | Q96B01-2 | 4 | EBI-297202,EBI-1178743 | |
| RAD51AP1 | Q96B01-3 | 5 | EBI-297202,EBI-1178748 | |
| RAD52 | P43351 | 3 | EBI-297202,EBI-706448 | |
| TP53 | P04637 | 2 | EBI-297202,EBI-366083 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q06609-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q06609-2) The sequence of this isoform differs from the canonical sequence as follows: 77-173: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q06609-3) The sequence of this isoform differs from the canonical sequence as follows: 259-284: FGVAVVITNQVVAQVDGAAMFAADPK → IVSEERKRGNQNLQNLRLSLSS 285-339: Missing. | ||||||
| Note: Mutagenesis of Arg-264 to Ala inhibits nuclear localization. Mutagenesis of Lys-264 to Gln inhibits nuclear localization. Deletion of 254-Arg-Lys-255 inhibits nuclear localization. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 339 | 339 | DNA repair protein RAD51 homolog 1 | PRO_0000122932 | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Domain | 48 – 77 | 30 | HhH | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Nucleotide binding | 127 – 134 | 8 | ATP By similarity | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 184 – 257 | 74 | Interaction with PALB2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 54 | 1 | Phosphotyrosine; by ABL1 Ref.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 309 | 1 | Phosphothreonine; by CHEK1 Ref.22 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 77 – 173 | 97 | Missing in isoform 2. | VSP_005556 | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 259 – 284 | 26 | FGVAV…AADPK → IVSEERKRGNQNLQNLRLSL SS in isoform 3. | VSP_041724 | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 285 – 339 | 55 | Missing in isoform 3. | VSP_041725 | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 150 | 1 | R → Q in BC; familial. Ref.33 | VAR_010899 | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 309 | 1 | T → A: Confers hypersensitivity to hydroxyurea. Ref.22 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 313 | 1 | K → Q in BAA02962. Ref.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 25 – 30 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 35 – 42 | 8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 49 – 51 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 54 – 56 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 57 – 61 | 5 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 62 – 65 | 4 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 70 – 81 | 12 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 107 – 112 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 113 – 115 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 116 – 118 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 121 – 126 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 133 – 143 | 11 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 148 – 150 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 154 – 164 | 11 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 168 – 177 | 10 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 182 – 187 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 189 – 193 | 5 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 197 – 213 | 17 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 216 – 222 | 7 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 226 – 228 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 238 – 259 | 22 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 262 – 267 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 298 – 304 | 7 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 309 – 314 | 6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 323 – 330 | 8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 333 – 335 | 3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning of human, mouse and fission yeast recombination genes homologous to RAD51 and recA." Shinohara A., Ogawa H., Matsuda Y., Ushio N., Ikeo K., Ogawa T. Nat. Genet. 4:239-243(1993) [PubMed: 8358431] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [2] | "Cloning and sequence of the human RecA-like gene cDNA." Yoshimura Y., Morita T., Yamamoto A., Matsushiro A. Nucleic Acids Res. 21:1665-1665(1993) [PubMed: 8479919] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Testis. |
| [3] | "Characterization of the human Rad51 genomic locus and examination of tumors with 15q14-15 loss of heterozygosity (LOH)." Schmutte C., Tombline G., Rhiem K., Sadoff M.M., Schmutzler R., von Deimling A., Fishel R. Cancer Res. 59:4564-4569(1999) [PubMed: 10493508] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [4] | "A single nucleotide polymorphism in the 5' untranslated region of RAD51 and risk of cancer among BRCA1/2 mutation carriers." Wang W.W., Spurdle A.B., Kolachana P., Bove B., Modan B., Ebbers S.M., Suthers G., Tucker M.A., Kaufman D.J., Doody M.M., Tarone R.E., Daly M., Levavi H., Pierce H., Chetrit A., Yechezkel G.H., Chenevix-Trench G., Offit K., Godwin A.K., Struewing J.P. Cancer Epidemiol. Biomarkers Prev. 10:955-960(2001) [PubMed: 11535547] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [5] | "Identification of a novel human Rad51 variant that promotes DNA strand exchange." Park J.Y., Yoo H.W., Kim B.R., Park R., Choi S.Y., Kim Y. Nucleic Acids Res. 36:3226-3234(2008) [PubMed: 18417535] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3), FUNCTION OF ISOFORMS 1 AND 3, TISSUE SPECIFICITY (ISOFORMS 1 AND 3), SUBCELLULAR LOCATION (ISOFORMS 1 AND 3), MUTAGENESIS (ISOFORM 3). |
| [6] | NIEHS SNPs program Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [7] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [8] | "Analysis of the DNA sequence and duplication history of human chromosome 15." Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A. Nusbaum C.Nature 440:671-675(2006) [PubMed: 16572171] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [9] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [10] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Placenta. |
| [11] | "Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)." Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [12] | "Purification and characterization of the human Rad51 protein, an analogue of E. coli RecA." Benson F.E., Stasiak A., West S.C. EMBO J. 13:5764-5771(1994) [PubMed: 7988572] [Abstract] Cited for: CHARACTERIZATION. |
| [13] | "Interaction of human recombination proteins Rad51 and Rad54." Golub E.I., Kovalenko O.V., Gupta R.C., Ward D.C., Radding C.M. Nucleic Acids Res. 25:4106-4110(1997) [PubMed: 9321665] [Abstract] Cited for: INTERACTION WITH RAD54L. |
| [14] | "A novel nucleic acid-binding protein that interacts with human rad51 recombinase." Kovalenko O.V., Golub E.I., Bray-Ward P., Ward D.C., Radding C.M. Nucleic Acids Res. 25:4946-4953(1997) [PubMed: 9396801] [Abstract] Cited for: INTERACTION WITH RAD51AP1. |
| [15] | "RAB22 and RAB163/mouse BRCA2: proteins that specifically interact with the RAD51 protein." Mizuta R., LaSalle J.M., Cheng H.-L., Shinohara A., Ogawa H., Copeland N.G., Jenkins N.A., Lalande M., Alt F.W. Proc. Natl. Acad. Sci. U.S.A. 94:6927-6932(1997) [PubMed: 9192668] [Abstract] Cited for: INTERACTION WITH RAD51AP1, SUBCELLULAR LOCATION. |
| [16] | "Regulation of Rad51 function by c-Abl in response to DNA damage." Yuan Z.M., Huang Y., Ishiko T., Nakada S., Utsugisawa T., Kharbanda S., Wang R., Sung P., Shinohara A., Weichselbaum R., Kufe D. J. Biol. Chem. 273:3799-3802(1998) [PubMed: 9461559] [Abstract] Cited for: INTERACTION WITH ABL1, PHOSPHORYLATION AT TYR-54. |
| [17] | "A novel human Rad54 homologue, Rad54B, associates with Rad51." Tanaka K., Hiramoto T., Fukuda T., Miyagawa K. J. Biol. Chem. 275:26316-26321(2000) [PubMed: 10851248] [Abstract] Cited for: INTERACTION WITH RAD54B. |
| [18] | "Homologous DNA pairing by human recombination factors Rad51 and Rad54." Sigurdsson S., Van Komen S., Petukhova G., Sung P. J. Biol. Chem. 277:42790-42794(2002) [PubMed: 12205100] [Abstract] Cited for: FUNCTION. |
| [19] | "Involvement of Rad51C in two distinct protein complexes of Rad51 paralogs in human cells." Liu N., Schild D., Thelen M.P., Thompson L.H. Nucleic Acids Res. 30:1009-1015(2002) [PubMed: 11842113] [Abstract] Cited for: INTERACTION WITH XRCC3. |
| [20] | "Complex formation by the human Rad51B and Rad51C DNA repair proteins and their activities in vitro." Lio Y.-C., Mazin A.V., Kowalczykowski S.C., Chen D.J. J. Biol. Chem. 278:2469-2478(2003) [PubMed: 12427746] [Abstract] Cited for: IDENTIFICATION IN A COMPLEX WITH RAD51B AND RAD51C. |
| [21] | "Cellular localization of human Rad51C and regulation of ubiquitin-mediated proteolysis of Rad51." Bennett B.T., Knight K.L. J. Cell. Biochem. 96:1095-1109(2005) [PubMed: 16215984] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [22] | "The cell-cycle checkpoint kinase Chk1 is required for mammalian homologous recombination repair." Soerensen C.S., Hansen L.T., Dziegielewski J., Syljuaesen R.G., Lundin C., Bartek J., Helleday T. Nat. Cell Biol. 7:195-201(2005) [PubMed: 15665856] [Abstract] Cited for: INTERACTION WITH CHEK1, SUBCELLULAR LOCATION, PHOSPHORYLATION AT THR-309, MUTAGENESIS OF THR-309. |
| [23] | "RAD51AP2, a novel vertebrate- and meiotic-specific protein, shares a conserved RAD51-interacting C-terminal domain with RAD51AP1/PIR51." Kovalenko O.V., Wiese C., Schild D. Nucleic Acids Res. 34:5081-5092(2006) [PubMed: 16990250] [Abstract] Cited for: INTERACTION WITH RAD51AP2. |
| [24] | "Single-stranded DNA-binding protein hSSB1 is critical for genomic stability." Richard D.J., Bolderson E., Cubeddu L., Wadsworth R.I.M., Savage K., Sharma G.G., Nicolette M.L., Tsvetanov S., McIlwraith M.J., Pandita R.K., Takeda S., Hay R.T., Gautier J., West S.C., Paull T.T., Pandita T.K., White M.F., Khanna K.K. Nature 453:677-681(2008) [PubMed: 18449195] [Abstract] Cited for: INTERACTION WITH OBFC2B. |
| [25] | "Cellular redistribution of Rad51 in response to DNA damage: novel role for Rad51C." Gildemeister O.S., Sage J.M., Knight K.L. J. Biol. Chem. 284:31945-31952(2009) [PubMed: 19783859] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [26] | "Discovery of a novel function for human Rad51: maintenance of the mitochondrial genome." Sage J.M., Gildemeister O.S., Knight K.L. J. Biol. Chem. 285:18984-18990(2010) [PubMed: 20413593] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INDUCTION. |
| [27] | "Regulation of DNA Repair through DeSUMOylation and SUMOylation of Replication Protein A Complex." Dou H., Huang C., Singh M., Carpenter P.B., Yeh E.T. Mol. Cell 39:333-345(2010) [PubMed: 20705237] [Abstract] Cited for: INTERACTION WITH RPA1. |
| [28] | "A PP4 phosphatase complex dephosphorylates RPA2 to facilitate DNA repair via homologous recombination." Lee D.H., Pan Y., Kanner S., Sung P., Borowiec J.A., Chowdhury D. Nat. Struct. Mol. Biol. 17:365-372(2010) [PubMed: 20154705] [Abstract] Cited for: INTERACTION WITH RPA2, SUBCELLULAR LOCATION. |
| [29] | "Cooperation of breast cancer proteins PALB2 and piccolo BRCA2 in stimulating homologous recombination." Buisson R., Dion-Cote A.M., Coulombe Y., Launay H., Cai H., Stasiak A.Z., Stasiak A., Xia B., Masson J.Y. Nat. Struct. Mol. Biol. 17:1247-1254(2010) [PubMed: 20871615] [Abstract] Cited for: INTERACTION WITH PALB2. |
| [30] | "The role of human SWI5-MEI5 complex in homologous recombination repair." Yuan J., Chen J. J. Biol. Chem. 286:9888-9893(2011) [PubMed: 21252223] [Abstract] Cited for: INTERACTION WITH SWI5 AND SFR1. |
| [31] | "hSWS1.SWSAP1 is an evolutionarily conserved complex required for efficient homologous recombination repair." Liu T., Wan L., Wu Y., Chen J., Huang J. J. Biol. Chem. 286:41758-41766(2011) [PubMed: 21965664] [Abstract] Cited for: INTERACTION WITH SWSAP1. |
| [32] | "The N-terminal domain of the human Rad51 protein binds DNA: structure and a DNA binding surface as revealed by NMR." Aihara H., Ito Y., Kurumizaka H., Yokoyama S., Shibata T. J. Mol. Biol. 290:495-504(1999) [PubMed: 10390347] [Abstract] Cited for: STRUCTURE BY NMR OF 1-114. |
| [33] | "Identification of Rad51 alteration in patients with bilateral breast cancer." Kato M., Yano K., Matsuo F., Saito H., Katagiri T., Kurumizaka H., Yoshimoto M., Kasumi F., Akiyama F., Sakamoto G., Nagawa H., Nakamura Y., Miki Y. J. Hum. Genet. 45:133-137(2000) [PubMed: 10807537] [Abstract] Cited for: VARIANT BC GLN-150. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | D13804 mRNA. Translation: BAA02962.1. D14134 mRNA. Translation: BAA03189.1. AF165094 AF165093 Genomic DNA. Translation: AAD49705.1.AF233744 AF233743 Genomic DNA. Translation: AAF69145.1.EU362635 mRNA. Translation: ABY59731.1. AY196785 Genomic DNA. Translation: AAN87149.1. AK313503 mRNA. Translation: BAG36283.1. CH471125 Genomic DNA. Translation: EAW92434.1. BC001459 mRNA. Translation: AAH01459.1. CR536559 mRNA. Translation: CAG38796.1. AC012476 Genomic DNA. No translation available. AC022405 Genomic DNA. No translation available. CH471125 Genomic DNA. Translation: EAW92432.1. | ||||||||||||||||||
| IPI | IPI00032201. IPI00220649. IPI01010370. | ||||||||||||||||||
| PIR | I58295. | ||||||||||||||||||
| RefSeq | NP_001157742.1. NM_001164270.1. NP_002866.2. NM_002875.4. NP_597994.3. NM_133487.3. | ||||||||||||||||||
| UniGene | Hs.631709. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | Q06609. | ||||||||||||||||||
| SMR | Q06609. Positions 16-339. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| DIP | DIP-462N. | ||||||||||||||||||
| IntAct | Q06609. 24 interactions. | ||||||||||||||||||
| MINT | MINT-1374477. | ||||||||||||||||||
| STRING | Q06609. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q06609. | ||||||||||||||||||
Polymorphism databases | |||||||||||||||||||
| DMDM | 548663. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PRIDE | Q06609. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000267868; ENSP00000267868; ENSG00000051180. ENST00000423169; ENSP00000406602; ENSG00000051180. | ||||||||||||||||||
| GeneID | 5888. | ||||||||||||||||||
| KEGG | hsa:5888. | ||||||||||||||||||
| UCSC | uc001zmi.2. human. uc010bbv.1. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 5888. | ||||||||||||||||||
| GeneCards | GC15P040987. | ||||||||||||||||||
| H-InvDB | HIX0012136. | ||||||||||||||||||
| HGNC | HGNC:9817. RAD51. | ||||||||||||||||||
| HPA | CAB010381. | ||||||||||||||||||
| MIM | 114480. phenotype. 179617. gene. | ||||||||||||||||||
| neXtProt | NX_Q06609. | ||||||||||||||||||
| Orphanet | 145. Hereditary breast and ovarian cancer syndrome. | ||||||||||||||||||
| PharmGKB | PA34176. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | prNOG06903. | ||||||||||||||||||
| HOVERGEN | HBG001504. | ||||||||||||||||||
| OMA | SAMMAES. | ||||||||||||||||||
| OrthoDB | EOG47H5QB. | ||||||||||||||||||
| PhylomeDB | Q06609. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| Pathway_Interaction_DB | bard1pathway. BARD1 signaling events. | ||||||||||||||||||
| Reactome | REACT_111183. Meiosis. REACT_216. DNA Repair. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | Q06609. | ||||||||||||||||||
| Bgee | Q06609. | ||||||||||||||||||
| CleanEx | HS_RAD51. | ||||||||||||||||||
| Genevestigator | Q06609. | ||||||||||||||||||
| GermOnline | ENSG00000051180. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR003593. ATPase_AAA+_core. IPR011941. DNA_recomb/repair_Rad51. IPR013632. DNA_recomb/repair_Rad51_C. IPR016467. DNA_recomb/repair_RecA-like. IPR020588. DNA_recomb_RecA/RadB_ATP-bd. IPR010995. DNA_repair_Rad51/TF_NusA_a-hlx. IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif. IPR020587. RecA_monomer-monomer_interface. [Graphical view] | ||||||||||||||||||
| KO | K04482. | ||||||||||||||||||
| PANTHER | PTHR22942:SF12. PTHR22942:SF12. 1 hit. | ||||||||||||||||||
| Pfam | PF08423. Rad51. 1 hit. [Graphical view] | ||||||||||||||||||
| PIRSF | PIRSF005856. Rad51. 1 hit. | ||||||||||||||||||
| SMART | SM00382. AAA. 1 hit. SM00278. HhH1. 1 hit. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF47794. Rad51_N. 1 hit. | ||||||||||||||||||
| TIGRFAMs | TIGR02239. Recomb_RAD51. 1 hit. | ||||||||||||||||||
| PROSITE | PS50162. RECA_2. 1 hit. PS50163. RECA_3. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| NextBio | 22896. | ||||||||||||||||||
| PMAP-CutDB | Q06609. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | RAD51_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q06609 Secondary accession number(s): B0FXP0 Q9BV60 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 15 Human chromosome 15: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with