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Reviewed, UniProtKB/Swiss-Prot Q06169 (PEX30_YEAST)

Last modified June 16, 2009. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Peroxisomal membrane protein PEX30
Alternative name(s):
    Peroxin-30
Gene names
Name: PEX30
Ordered Locus Names: YLR324W
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

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Protein attributes

Sequence length523 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

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General annotation (Comments)

Subcellular location

Peroxisome membrane; Multi-pass membrane protein By similarity.

Sequence similarities

Belongs to the PEX28-32 family. PEX30/31 subfamily.

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Ontologies

Keywords
   Cellular componentMembrane
Peroxisome
   DomainTransmembrane
   PTMPhosphoprotein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processperoxisome organization

Inferred from mutant phenotype. Source: SGD

   Cellular componentintegral to peroxisomal membrane

Inferred from direct assay. Source: SGD

   Molecular functionidentical protein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 523523Peroxisomal membrane protein PEX30
PRO_0000252270

Regions

Transmembrane91 – 11121 Potential
Transmembrane118 – 13821 Potential
Transmembrane184 – 20421 Potential
Transmembrane207 – 22721 Potential

Amino acid modifications

Modified residue521Phosphoserine Ref.3
Modified residue611Phosphoserine Ref.3
Modified residue4201Phosphoserine Ref.3
Modified residue4241Phosphoserine Ref.3
Modified residue4841Phosphoserine Ref.3
Modified residue4851Phosphothreonine Ref.3

Experimental info

Sequence conflict2571G → S in AAU09766. Ref.2

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Sequences

Sequence LengthMass (Da)Tools
Q06169-1 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 417DBE56B1C8B1D5

FASTA52359,462
        10         20         30         40         50         60 
MSGNTTNVHE TRAKFAETLQ PRIGGNTTKV IRAALEKNEA ESGVSEDNDN GSLEKVNVAT 

        70         80         90        100        110        120 
SPLLTSTPPT ISKALVKLYP YLILIDEFLN VVTWTGKNIW SSVLMLCLFI TTVEYFETLV 

       130        140        150        160        170        180 
KYFGHLAIIA ILWGYSLLDN YIEGTLSSSP TLEDIALLMN RVSLKSDILL SPMVNLGTQD 

       190        200        210        220        230        240 
IQRLLYTTVI LSPIYVMITW LLLPPRSLML MVGMFLLTYH SPWSKVARRL LWKFKIVRLL 

       250        260        270        280        290        300 
VFYVTGLDLG GINKDQGIFA TVQKQVKKLA STENSNGVLS DSKPIRFTYV LYENQRRWLG 

       310        320        330        340        350        360 
IGWKPSMLSY ERTPWTDEFL NEAPSPENFH LPEETNTMVW RWVDKTWRLD MTNDGAIQVP 

       370        380        390        400        410        420 
NSKARTSADP SPDEGFIYYD NTWKKPSKED SFSKYTRRRR WVRTAELVKT SDFDESVINS 

       430        440        450        460        470        480 
NRNSAIEQKV EENSTNGLTA EQELGSNKQE KDNAKKVGEP TTEETKEFAE ASNINEGEFE 

       490        500        510        520 
RISSTDEEVL KSRARDRLAK VLDDTEEKEQ SNPTIGRDSK KAV

« Hide

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References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XII."
Johnston M., Hillier L.W., Riles L., Albermann K., Andre B., Ansorge W., Benes V., Brueckner M., Delius H., Dubois E., Duesterhoeft A., Entian K.-D., Floeth M., Goffeau A., Hebling U., Heumann K., Heuss-Neitzel D., Hilbert H. expand/collapse author list , Hilger F., Kleine K., Koetter P., Louis E.J., Messenguy F., Mewes H.-W., Miosga T., Moestl D., Mueller-Auer S., Nentwich U., Obermaier B., Piravandi E., Pohl T.M., Portetelle D., Purnelle B., Rechmann S., Rieger M., Rinke M., Rose M., Scharfe M., Scherens B., Scholler P., Schwager C., Schwarz S., Underwood A.P., Urrestarazu L.A., Vandenbol M., Verhasselt P., Vierendeels F., Voet M., Volckaert G., Voss H., Wambutt R., Wedler E., Wedler H., Zimmermann F.K., Zollner A., Hani J., Hoheisel J.D.
Nature 387:87-90(1997) [PubMed: 9169871] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed: 17322287] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[3]"A multidimensional chromatography technology for in-depth phosphoproteome analysis."
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed: 18407956] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-52; SER-61; SER-420; SER-424; SER-484 AND THR-485, MASS SPECTROMETRY.
+Additional computationally mapped references.

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Cross-references

Sequence databases

U20618 Genomic DNA. Translation: AAB64522.1.
AY723849 Genomic DNA. Translation: AAU09766.1.
PIRS53401.
RefSeqNP_013428.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:1800N.
IntActQ06169. 18 interactions.

Proteomic databases

PeptideAtlasQ06169.

Genome annotation databases

EnsemblYLR324W. Saccharomyces cerevisiae. [Contig view]
GeneID851034.
GenomeReviewsGene locus YLR324W in contig Y13138_GR.
KEGGsce:YLR324W.
NMPDRfig|4932.3.peg.4448.

Organism-specific databases

CYGDYLR324w.
SGDS000004316. PEX30.
Yeast-GFPSearch...

Phylogenomic databases

HOGENOMQ06169.
OMAQ06169. SFSKYTR.

Gene expression databases

ArrayExpressQ06169.
GermOnlineYLR324W. Saccharomyces cerevisiae.

Family and domain databases

InterProIPR006614. DysF_C.
IPR006613. DysF_N.
IPR010482. Pex24p.
[Graphical view]
PfamPF06398. Pex24p. 1 hit.
[Graphical view]
SMARTSM00694. DysFC. 1 hit.
SM00693. DysFN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio967625.

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Entry information

Entry namePEX30_YEAST
AccessionPrimary (citable) accession number: Q06169
Secondary accession number(s): Q66R43
Entry history
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: November 1, 1996
Last modified: June 16, 2009
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

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Relevant documents

SIMILARITY comments

Index of protein domains and families

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents