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Q06126

- TNPA_BORPP

UniProt

Q06126 - TNPA_BORPP

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Protein
Transposase for insertion sequence element IS1001
Gene
tnpA
Organism
Bordetella parapertussis
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Involved in the transposition of the insertion sequence.

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. transposase activity Source: InterPro

GO - Biological processi

  1. transposition, DNA-mediated Source: InterPro
Complete GO annotation...

Keywords - Biological processi

DNA recombination, Transposition

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Transposase for insertion sequence element IS1001
Gene namesi
Name:tnpA
OrganismiBordetella parapertussis
Taxonomic identifieri519 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 406406Transposase for insertion sequence element IS1001
PRO_0000075451Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the transposase 12 family.

Phylogenomic databases

eggNOGiCOG3464.

Family and domain databases

InterProiIPR002560. Transposase.
IPR029261. Transposase_zf.
[Graphical view]
PfamiPF01610. DDE_Tnp_ISL3. 1 hit.
PF14690. zf-ISL3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q06126-1 [UniParc]FASTAAdd to Basket

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MLDRKLMESL GGWQGYGVER VEWPEDPGRT LSIYLKPTAK VMLCEQCGAR    50
CRQVHETTVR RVRDLPIFEY RVVLHVPRRR LWCEQCGGPR LERLAWLGRY 100
QRVTDRLAQA CSQLLQSSNV QAVARFFELG WHTVKTLDKA RLRASVREPD 150
WSKIEYLAMD EFALHKGHRY ATVVVDPIGR QVLWIGPGRS RETARAFFEQ 200
LPPGAAQRIK AVAIDMTTAY ELEIQAHSPQ AEIVYDLFHV VAKYGREVID 250
RVRVDQANQL RQDRPARRII KSSRWLLLRN RDNLDRQQAV RLDELLQANQ 300
PLLTVYVLRD ELKRLWFYQR PAWARQAWNH WYEQAEQSGI AALNTFAQRL 350
KGYLHGILAR CRHPLNTSIV EGINNTIKVI KRRAYGYRDQ EYFFLKIRAA 400
FPGNAR 406
Length:406
Mass (Da):47,527
Last modified:June 1, 1994 - v1
Checksum:i0445CDFD22716A5E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X66858 Genomic DNA. Translation: CAA47326.1.
PIRiA40629.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X66858 Genomic DNA. Translation: CAA47326.1 .
PIRi A40629.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

eggNOGi COG3464.

Family and domain databases

InterProi IPR002560. Transposase.
IPR029261. Transposase_zf.
[Graphical view ]
Pfami PF01610. DDE_Tnp_ISL3. 1 hit.
PF14690. zf-ISL3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Characterization of IS1001, an insertion sequence element of Bordetella parapertussis."
    van der Zee A., Agterberg C., van Agterveld M., Peeters M., Mooi F.R.
    J. Bacteriol. 175:141-147(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiTNPA_BORPP
AccessioniPrimary (citable) accession number: Q06126
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: June 11, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Transposable element

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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