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Q06126

- TNPA_BORPP

UniProt

Q06126 - TNPA_BORPP

Protein

Transposase for insertion sequence element IS1001

Gene

tnpA

Organism
Bordetella parapertussis
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (01 Jun 1994)
      Previous versions | rss
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    Functioni

    Involved in the transposition of the insertion sequence.

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. transposase activity Source: InterPro

    GO - Biological processi

    1. transposition, DNA-mediated Source: InterPro

    Keywords - Biological processi

    DNA recombination, Transposition

    Keywords - Ligandi

    DNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Transposase for insertion sequence element IS1001
    Gene namesi
    Name:tnpA
    OrganismiBordetella parapertussis
    Taxonomic identifieri519 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 406406Transposase for insertion sequence element IS1001PRO_0000075451Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the transposase 12 family.Curated

    Phylogenomic databases

    eggNOGiCOG3464.

    Family and domain databases

    InterProiIPR002560. Transposase.
    IPR029261. Transposase_zf.
    [Graphical view]
    PfamiPF01610. DDE_Tnp_ISL3. 1 hit.
    PF14690. zf-ISL3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q06126-1 [UniParc]FASTAAdd to Basket

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    MLDRKLMESL GGWQGYGVER VEWPEDPGRT LSIYLKPTAK VMLCEQCGAR    50
    CRQVHETTVR RVRDLPIFEY RVVLHVPRRR LWCEQCGGPR LERLAWLGRY 100
    QRVTDRLAQA CSQLLQSSNV QAVARFFELG WHTVKTLDKA RLRASVREPD 150
    WSKIEYLAMD EFALHKGHRY ATVVVDPIGR QVLWIGPGRS RETARAFFEQ 200
    LPPGAAQRIK AVAIDMTTAY ELEIQAHSPQ AEIVYDLFHV VAKYGREVID 250
    RVRVDQANQL RQDRPARRII KSSRWLLLRN RDNLDRQQAV RLDELLQANQ 300
    PLLTVYVLRD ELKRLWFYQR PAWARQAWNH WYEQAEQSGI AALNTFAQRL 350
    KGYLHGILAR CRHPLNTSIV EGINNTIKVI KRRAYGYRDQ EYFFLKIRAA 400
    FPGNAR 406
    Length:406
    Mass (Da):47,527
    Last modified:June 1, 1994 - v1
    Checksum:i0445CDFD22716A5E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X66858 Genomic DNA. Translation: CAA47326.1.
    PIRiA40629.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X66858 Genomic DNA. Translation: CAA47326.1 .
    PIRi A40629.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    eggNOGi COG3464.

    Family and domain databases

    InterProi IPR002560. Transposase.
    IPR029261. Transposase_zf.
    [Graphical view ]
    Pfami PF01610. DDE_Tnp_ISL3. 1 hit.
    PF14690. zf-ISL3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of IS1001, an insertion sequence element of Bordetella parapertussis."
      van der Zee A., Agterberg C., van Agterveld M., Peeters M., Mooi F.R.
      J. Bacteriol. 175:141-147(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

    Entry informationi

    Entry nameiTNPA_BORPP
    AccessioniPrimary (citable) accession number: Q06126
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 1, 1994
    Last sequence update: June 1, 1994
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Transposable element

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3