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Q06126 (TNPA_BORPP) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Transposase for insertion sequence element IS1001
Gene names
Name:tnpA
OrganismBordetella parapertussis
Taxonomic identifier519 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length406 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the transposition of the insertion sequence.

Sequence similarities

Belongs to the transposase 12 family.

Ontologies

Keywords
   Biological processDNA recombination
Transposition
   LigandDNA-binding
   Technical termTransposable element
Gene Ontology (GO)
   Biological_processtransposition, DNA-mediated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

transposase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 406406Transposase for insertion sequence element IS1001
PRO_0000075451

Sequences

Sequence LengthMass (Da)Tools
Q06126 [UniParc].

Last modified June 1, 1994. Version 1.
Checksum: 0445CDFD22716A5E

FASTA40647,527
        10         20         30         40         50         60 
MLDRKLMESL GGWQGYGVER VEWPEDPGRT LSIYLKPTAK VMLCEQCGAR CRQVHETTVR 

        70         80         90        100        110        120 
RVRDLPIFEY RVVLHVPRRR LWCEQCGGPR LERLAWLGRY QRVTDRLAQA CSQLLQSSNV 

       130        140        150        160        170        180 
QAVARFFELG WHTVKTLDKA RLRASVREPD WSKIEYLAMD EFALHKGHRY ATVVVDPIGR 

       190        200        210        220        230        240 
QVLWIGPGRS RETARAFFEQ LPPGAAQRIK AVAIDMTTAY ELEIQAHSPQ AEIVYDLFHV 

       250        260        270        280        290        300 
VAKYGREVID RVRVDQANQL RQDRPARRII KSSRWLLLRN RDNLDRQQAV RLDELLQANQ 

       310        320        330        340        350        360 
PLLTVYVLRD ELKRLWFYQR PAWARQAWNH WYEQAEQSGI AALNTFAQRL KGYLHGILAR 

       370        380        390        400 
CRHPLNTSIV EGINNTIKVI KRRAYGYRDQ EYFFLKIRAA FPGNAR 

« Hide

References

[1]"Characterization of IS1001, an insertion sequence element of Bordetella parapertussis."
van der Zee A., Agterberg C., van Agterveld M., Peeters M., Mooi F.R.
J. Bacteriol. 175:141-147(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X66858 Genomic DNA. Translation: CAA47326.1.
PIRA40629.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGCOG3464.

Family and domain databases

InterProIPR002560. Transposase.
IPR029261. Transposase_zf.
[Graphical view]
PfamPF01610. DDE_Tnp_ISL3. 1 hit.
PF14690. zf-ISL3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTNPA_BORPP
AccessionPrimary (citable) accession number: Q06126
Entry history
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: June 11, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families