Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

DNA-binding protein APE_1087b

Gene

APE_1087b

Organism
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding

Enzyme and pathway databases

BioCyciAPER272557:GJD6-769-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-binding protein APE_1087bUniRule annotation
Gene namesi
Ordered Locus Names:APE_1087b
OrganismiAeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Taxonomic identifieri272557 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeAeropyrum
Proteomesi
  • UP000002518 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002845581 – 115DNA-binding protein APE_1087bAdd BLAST115

Proteomic databases

PRIDEiQ05E29

Interactioni

Protein-protein interaction databases

STRINGi272557.APE_1087b

Structurei

3D structure databases

ProteinModelPortaliQ05E29
SMRiQ05E29
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PDCD5 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04179 Archaea
COG2118 LUCA
HOGENOMiHOG000194121
KOiK06875
OMAiRLNTVKM
OrthoDBiPOG093Z0OC7

Family and domain databases

Gene3Di1.10.8.140, 1 hit
HAMAPiMF_00026 dsDNA_bind, 1 hit
InterProiView protein in InterPro
IPR022889 DNA_bind_arc
IPR002836 PDCD5-like
IPR036883 PDCD5-like_sf
PANTHERiPTHR10840 PTHR10840, 1 hit
PfamiView protein in Pfam
PF01984 dsDNA_bind, 1 hit
PIRSFiPIRSF015730 TFAR19, 1 hit
SUPFAMiSSF46950 SSF46950, 1 hit

Sequencei

Sequence statusi: Complete.

Q05E29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYEYDDELE EIRRRKMLEL QRRLEEERRR EEEQARLRAQ KDAILRRLLT
60 70 80 90 100
SKARERLANL RLVRPEIAEA AENAVIQLVQ TGRITPPVDD DTLVQILLEL
110
DRSTRRDFEI RIKRK
Length:115
Mass (Da):13,910
Last modified:November 14, 2006 - v1
Checksum:i3B991983D42C2EC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000002 Genomic DNA Translation: BAF34772.1

Genome annotation databases

EnsemblBacteriaiBAF34772; BAF34772; APE_1087b
KEGGiape:APE_1087b

Similar proteinsi

Entry informationi

Entry nameiY1087_AERPE
AccessioniPrimary (citable) accession number: Q05E29
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: November 14, 2006
Last modified: May 23, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health