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Unreviewed, UniProtKB/TrEMBL Q05CU3 (Q05CU3_HUMAN)

Last modified November 25, 2008. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    TRIM5 protein EMBL AAH20770.1
Gene names
Name: TRIM5 EMBL AAH20770.1
OrganismHomo sapiens (Human) EMBL AAH20770.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length219 AA.
Sequence statusFragment.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue2191 EMBL AAH20770.1

Sequences

Sequence LengthMass (Da)Tools
Q05CU3-1 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 567349F3473055F5

FASTA21925,486
        10         20         30         40         50         60 
MASGILVNVK EEVTCPICLE LLTQPLSLDC GHSFCQACLT ANHKKSMLDK GESSCPVCRI 

        70         80         90        100        110        120 
SYQPENIRPN RHVANIVEKL REVKLSPEGQ KVDHCARHGE KLLLFCQEDG KVICWLCERS 

       130        140        150        160        170        180 
QEHRGHHTFL TEEVAREYQV KLQAALEMLR QKQQEAEELE ADIREEKASW KTQIQYDKTN 

       190        200        210 
VLADFEQLRD ILDWEESNEL QNLEKEEEDK KKKKKKKKK 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Placenta EMBL AAH20770.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

BC020770 mRNA. Translation: AAH20770.1.
UniGeneHs.370515

3D structure databases

ModBaseSearch...

Genome annotation databases

EnsemblENSG00000132256. Homo sapiens. [Contig view]

Organism-specific databases

HGNCHGNC:16276. TRIM5.
GenAtlasSearch...
GeneCardsSearch...

Phylogenomic databases

HOVERGENQ05CU3.

Gene expression databases

ArrayExpressQ05CU3.

Family and domain databases

InterProIPR000315. Znf_B-box.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view]
Gene3DG3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
PfamPF00643. zf-B_box. 1 hit.
[Graphical view]
PRINTSPR01406. BBOXZNFINGER.
SMARTSM00336. BBOX. 1 hit.
SM00184. RING. 1 hit.
[Graphical view]
PROSITEPS50119. ZF_BBOX. 1 hit.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]

Entry information

Entry nameQ05CU3_HUMAN
AccessionPrimary (citable) accession number: Q05CU3
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: November 25, 2008
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information