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Q05CU3 (Q05CU3_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:TRIM5 EMBL AAH20770.1
OrganismHomo sapiens (Human) EMBL AAH20770.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length219 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 RING-type zinc finger. SAAS SAAS000315

Ontologies

Keywords
   DomainZinc-finger SAAS SAAS000315 RuleBase RU000353
   LigandMetal-binding
Zinc
Gene Ontology (GO)
   Cellular componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular functionzinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue2191 EMBL AAH20770.1

Sequences

Sequence LengthMass (Da)Tools
Q05CU3 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 567349F3473055F5

FASTA21925,486
        10         20         30         40         50         60 
MASGILVNVK EEVTCPICLE LLTQPLSLDC GHSFCQACLT ANHKKSMLDK GESSCPVCRI 

        70         80         90        100        110        120 
SYQPENIRPN RHVANIVEKL REVKLSPEGQ KVDHCARHGE KLLLFCQEDG KVICWLCERS 

       130        140        150        160        170        180 
QEHRGHHTFL TEEVAREYQV KLQAALEMLR QKQQEAEELE ADIREEKASW KTQIQYDKTN 

       190        200        210 
VLADFEQLRD ILDWEESNEL QNLEKEEEDK KKKKKKKKK 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Placenta EMBL AAH20770.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC020770 mRNA. Translation: AAH20770.1.
IPIIPI00394975.
UniGeneHs.370515.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ05CU3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc001mbq.1. human.

Phylogenomic databases

GeneTreeENSGT00600000084196.
HOVERGENHBG084408.

Gene expression databases

ArrayExpressQ05CU3.
BgeeQ05CU3.

Family and domain databases

InterProIPR000315. Znf_B-box.
IPR018957. Znf_C3HC4_RING-type.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view]
Gene3DG3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
PfamPF00643. zf-B_box. 1 hit.
PF00097. zf-C3HC4. 1 hit.
[Graphical view]
SMARTSM00336. BBOX. 1 hit.
SM00184. RING. 1 hit.
[Graphical view]
PROSITEPS50119. ZF_BBOX. 1 hit.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ05CU3_HUMAN
AccessionPrimary (citable) accession number: Q05CU3
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: November 16, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.