Unreviewed, UniProtKB/TrEMBL Q05CU3 (Q05CU3_HUMAN)

Names and origin

Protein names

Submitted name:
    TRIM5 protein EMBL AAH20770.1

Gene names

Name:

TRIM5 EMBL AAH20770.1

Organism

Homo sapiens (Human) EMBL AAH20770.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	219 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 B box-type zinc finger. RuleBase RU004467V0 Contains 1 RING-type zinc finger. RuleBase RU000353V2 Spearmint SPM000315

Ontologies

Keywords
Domain	Zinc-finger Spearmint SPM000315 RuleBase RU004467V0 RuleBase RU000353V2
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	219	1	EMBL AAH20770.1

Sequences

	Sequence		Length	Mass (Da)
	Q05CU3-1 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 567349F3473055F5	FASTA	219	25,486
	10 20 30 40 50 60 MASGILVNVK EEVTCPICLE LLTQPLSLDC GHSFCQACLT ANHKKSMLDK GESSCPVCRI 70 80 90 100 110 120 SYQPENIRPN RHVANIVEKL REVKLSPEGQ KVDHCARHGE KLLLFCQEDG KVICWLCERS 130 140 150 160 170 180 QEHRGHHTFL TEEVAREYQV KLQAALEMLR QKQQEAEELE ADIREEKASW KTQIQYDKTN 190 200 210 VLADFEQLRD ILDWEESNEL QNLEKEEEDK KKKKKKKKK

References

[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Placenta EMBL AAH20770.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC020770 mRNA. Translation: AAH20770.1.
UniGene	Hs.370515
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000132256. Homo sapiens. [Contig view]
Organism-specific databases
HGNC	HGNC:16276. TRIM5.
GenAtlas	Search...
GeneCards	Search...
Phylogenomic databases
HOVERGEN	Q05CU3.
Gene expression databases
ArrayExpress	Q05CU3.
Family and domain databases
InterPro	IPR000315. Znf_B-box. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. [Graphical view]
Gene3D	G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
Pfam	PF00643. zf-B_box. 1 hit. [Graphical view]
PRINTS	PR01406. BBOXZNFINGER.
SMART	SM00336. BBOX. 1 hit. SM00184. RING. 1 hit. [Graphical view]
PROSITE	PS50119. ZF_BBOX. 1 hit. PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]

Entry information

Entry name

Q05CU3_HUMAN

Accession

Primary (citable) accession number: Q05CU3

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	November 25, 2008
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)