Unreviewed, UniProtKB/TrEMBL Q05CA6 (Q05CA6_HUMAN)

Names and origin

Protein names

Submitted name:
    GATA6 protein EMBL AAH27891.1

Gene names

Name:

GATA6 EMBL AAH27891.1

Organism

Homo sapiens (Human) EMBL AAH27891.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	172 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	apoptosis Inferred from electronic annotation. Source: Compara endoderm development Inferred from electronic annotation. Source: Compara in utero embryonic development Inferred from electronic annotation. Source: Compara liver development Inferred from electronic annotation. Source: Compara positive regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	RNA polymerase II transcription factor activity, enhancer binding Inferred from electronic annotation. Source: Compara chromatin binding Inferred from electronic annotation. Source: Compara protein binding Inferred from electronic annotation. Source: Compara transcription activator activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	172	1	EMBL AAH27891.1

Sequences

	Sequence		Length	Mass (Da)
	Q05CA6-1 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: F789404A9AF3C76C	FASTA	172	17,243
	10 20 30 40 50 60 MALTDGGWCL PKRFGAAGAD ASDSRAFPAR EPSTPPSPIS SSSSSCSRGG ERGPGGASNC 70 80 90 100 110 120 GTPQLDTEAA AGPPARSLLL SSYASHPFGA PHGPSAPGVA GPGGNLSSWE DLLLFTDLDQ 130 140 150 160 170 AATASKLLWS SRGAKLSPFA PEQPEEMYQT LAALSSQGPA AYDGAPGGFV HS

References

[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Pancreas EMBL AAH27891.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC027891 mRNA. Translation: AAH27891.1.
IPI	IPI00024236.
RefSeq	NP_005248.2.
UniGene	Hs.514746
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000141448. Homo sapiens. [Contig view]
GeneID	2627.
Organism-specific databases
HGNC	HGNC:4174. GATA6.
GenAtlas	Search...
Phylogenomic databases
HOVERGEN	Q05CA6.
Gene expression databases
ArrayExpress	Q05CA6.
Bgee	Q05CA6.
Family and domain databases
InterPro	IPR008013. GATA_N. [Graphical view]
Pfam	PF05349. GATA-N. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	10349.

Entry information

Entry name

Q05CA6_HUMAN

Accession

Primary (citable) accession number: Q05CA6

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	March 3, 2009
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)