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Protein
Submitted name:

PRPF40A protein

Gene

PRPF40A

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

SignaLinkiQ05C41.

Names & Taxonomyi

Protein namesi
Submitted name:
PRPF40A proteinImported
Gene namesi
Name:PRPF40AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA28195.

PTM / Processingi

Proteomic databases

PaxDbiQ05C41.
PeptideAtlasiQ05C41.
PRIDEiQ05C41.

Expressioni

Gene expression databases

GenevisibleiQ05C41. HS.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini98 – 131WWInterPro annotationAdd BLAST34
Domaini144 – 172WWInterPro annotationAdd BLAST29
Domaini351 – 405FFInterPro annotationAdd BLAST55

Phylogenomic databases

eggNOGiKOG0152. Eukaryota.
COG5104. LUCA.
HOGENOMiHOG000231802.
KOiK12821.

Family and domain databases

CDDicd00201. WW. 2 hits.
Gene3Di1.10.10.440. 1 hit.
InterProiView protein in InterPro
IPR002713. FF_domain.
IPR036517. FF_domain_sf.
IPR001202. WW_dom.
IPR036020. WW_dom_sf.
PfamiView protein in Pfam
PF01846. FF. 1 hit.
PF00397. WW. 2 hits.
SMARTiView protein in SMART
SM00441. FF. 1 hit.
SM00456. WW. 2 hits.
SUPFAMiSSF51045. SSF51045. 2 hits.
SSF81698. SSF81698. 1 hit.
PROSITEiView protein in PROSITE
PS51676. FF. 1 hit.
PS01159. WW_DOMAIN_1. 2 hits.
PS50020. WW_DOMAIN_2. 2 hits.

Sequencei

Sequence statusi: Fragment.

Q05C41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPGTGAERG GLMMGHPGMH YAPMGMHPMG QRANMPPVPH GMMPQMMPPM
60 70 80 90 100
GGPPMGQMPG MMSSVMPGMM MSHMSQASMQ PALPPGVNSM DVAAGTASGA
110 120 130 140 150
KSMWTEHKSP DGRTYYYNTE TKQSTWEKPD DLKTPAEQLL SKCPWKEYKS
160 170 180 190 200
DSGKPYYYNS QTKESRWAKP KELEDLEGYQ NTIVAGSLIT KSNLHAMIKA
210 220 230 240 250
EESSKQEECT TTSTAPVPTT EIPTTMSTMA AAEAAAAVVA AAAAAAAAAA
260 270 280 290 300
AANANASTSA SNTVSGTVPV VPEPEVTSIV ATVVDNENTV TISTEEQAQL
310 320 330 340 350
TSTPAIQDQS VEVSSNTGEE TSKQETVADF TPKKEEEESQ PAKKTYTWNT
360 370 380 390 400
KEEAKQAFKE LLKEKRVPSN ASWEQAMKMI INDPRYSALA KLSEKKQAFN
410
AYKVQKKKKK KKKK
Length:414
Mass (Da):44,773
Last modified:November 14, 2006 - v1
Checksum:i3945EEBFE1C292F4
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei414Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC029414 mRNA. Translation: AAH29414.1.
UniGeneiHs.643580.

Genome annotation databases

KEGGihsa:55660.

Entry informationi

Entry nameiQ05C41_HUMAN
AccessioniPrimary (citable) accession number: Q05C41
Entry historyiIntegrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: November 22, 2017
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.