Q05AJ3 (Q05AJ3_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GATA-binding protein 1 EMBL AAI24484.1

Submitted name:
Uncharacterized protein Ensembl ENSDARP00000002330 Ensembl ENSDARP00000098204

Gene names

Name:	gata1a Ensembl ENSDARP00000002330 ZFIN ZDB-GENE-980526-268 Ensembl ENSDARP00000098204
Synonyms:	gata1 ZFIN ZDB-GENE-980526-268 EMBL AAI24484.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome] EMBL AAI24484.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	418 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q05AJ3 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: EF3004D9010BC203	FASTA	418	45,665
	10 20 30 40 50 60 MENSSEPSRW VSPGLLSPDP LVNYTTDSGL LPPVDVDEPF YSSSETDLLP SYYSTSVQSR 70 80 90 100 110 120 ASSSYRHSPV RQVYSSQSIL GNIQWLDNSA GHSLNSPYNP TSTVWSSSPF AKTPLHSHTS 130 140 150 160 170 180 TSIYQNTATP SFTSPKEGFP SPSRDGKDSP RLQEVLKAER LSPMSGSGSS FLNLSSATGG 190 200 210 220 230 240 VYGPSPHMLS PYGSYMSTSQ DYSSAALYST GGPWMSPSSY SPKLRNKMRL SPPEARECVN 250 260 270 280 290 300 CGATATPLWR RDGTGHYLCN ACGLYHKMNG QNRPLIRPKK RLIVSKRAGT QCANCHTSTT 310 320 330 340 350 360 TLWRRNASGE PVCNACGLYF KLHNVNRPLT MKKDGIQTRN RKVSNRNKKG KKNAASEVYP 370 380 390 400 410 DMSHMAPPDE HVGAYSLNPG PLLSYSHPAH LLPTSTLHSS TTLPYTHHPN SGMMPTLV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Whole EMBL AAI24484.1.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000002330 Ensembl ENSDARP00000098204.
[3]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000002330 Ensembl ENSDARP00000098204.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR932000 Genomic DNA. No translation available. BC124483 mRNA. Translation: AAI24484.1.
IPI	IPI00512257.
UniGene	Dr.355.
3D structure databases
SMR	Q05AJ3. Positions 234-277, 286-349.
ModBase	Search...
Protein-protein interaction databases
STRING	7955.ENSDARP00000002330.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000013714; ENSDARP00000002330; ENSDARG00000013477. ENSDART00000112362; ENSDARP00000098204; ENSDARG00000013477.
Organism-specific databases
ZFIN	ZDB-GENE-980526-268. gata1a.
Phylogenomic databases
eggNOG	COG5641.
GeneTree	ENSGT00550000074470.
HOGENOM	HOG000047701.
HOVERGEN	HBG051705.
InParanoid	Q05AJ3.
OMA	TPEAREC.
OrthoDB	EOG4QNMWM.
Family and domain databases
Gene3D	3.30.50.10. 2 hits.
InterPro	IPR016374. TF_GATA-1/2/3. IPR000679. Znf_GATA. IPR013088. Znf_NHR/GATA. [Graphical view]
Pfam	PF00320. GATA. 2 hits. [Graphical view]
PIRSF	PIRSF003027. TF_GATA-1/2/3. 1 hit.
PRINTS	PR00619. GATAZNFINGER.
SMART	SM00401. ZnF_GATA. 2 hits. [Graphical view]
PROSITE	PS00344. GATA_ZN_FINGER_1. 2 hits. PS50114. GATA_ZN_FINGER_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q05AJ3_DANRE

Accession

Primary (citable) accession number: Q05AJ3

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	April 3, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)