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Q059I1

- Q059I1_MOUSE

UniProt

Q059I1 - Q059I1_MOUSE

Protein
Submitted name:

MCG22987, isoform CRA_a

Gene

Rps28

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: RefGenome

    GO - Biological processi

    1. ribosomal small subunit biogenesis Source: Ensembl
    2. rRNA export from nucleus Source: RefGenome
    3. rRNA processing Source: Ensembl
    4. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    MCG22987, isoform CRA_aImported
    Submitted name:
    Ribosomal protein S28Imported
    Submitted name:
    Rps28 proteinImported
    Gene namesi
    Name:Rps28Imported
    ORF Names:mCG_22987Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1859516. Rps28.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic small ribosomal subunit Source: RefGenome

    Expressioni

    Gene expression databases

    GenevestigatoriQ059I1.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2053.
    GeneTreeiENSGT00390000003580.
    HOVERGENiHBG000219.
    InParanoidiQ059I1.
    KOiK02979.
    OMAiAIVMKVI.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    HAMAPiMF_00292. Ribosomal_S28e.
    InterProiIPR012340. NA-bd_OB-fold.
    IPR000289. Ribosomal_S28e.
    IPR028626. Ribosomal_S28e_CS.
    [Graphical view]
    PANTHERiPTHR10769. PTHR10769. 1 hit.
    PfamiPF01200. Ribosomal_S28e. 1 hit.
    [Graphical view]
    ProDomiPD005541. Ribosomal_S28e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00961. RIBOSOMAL_S28E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q059I1-1 [UniParc]FASTAAdd to Basket

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    MDTSRVQPIK LARVTKVLGR TGSQGQCTQV RVEFMDDTSR SIIRNVKGPV   50
    REGDVLTLLE SEREARRLR 69
    Length:69
    Mass (Da):7,841
    Last modified:November 14, 2006 - v1
    Checksum:i49902FE9376EB74F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC125644 mRNA. Translation: AAI25645.1.
    BC125646 mRNA. Translation: AAI25647.1.
    CH466660 Genomic DNA. Translation: EDL10212.1.
    CH466660 Genomic DNA. Translation: EDL10213.1.
    RefSeqiNP_058540.1. NM_016844.2.
    XP_006524687.1. XM_006524624.1.
    XP_006525478.1. XM_006525415.1.
    XP_006536723.1. XM_006536660.1.
    XP_006537454.1. XM_006537391.1.
    UniGeneiMm.352374.
    Mm.353967.
    Mm.371603.
    Mm.393918.

    Genome annotation databases

    GeneIDi54127.
    KEGGimmu:54127.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC125644 mRNA. Translation: AAI25645.1 .
    BC125646 mRNA. Translation: AAI25647.1 .
    CH466660 Genomic DNA. Translation: EDL10212.1 .
    CH466660 Genomic DNA. Translation: EDL10213.1 .
    RefSeqi NP_058540.1. NM_016844.2.
    XP_006524687.1. XM_006524624.1.
    XP_006525478.1. XM_006525415.1.
    XP_006536723.1. XM_006536660.1.
    XP_006537454.1. XM_006537391.1.
    UniGenei Mm.352374.
    Mm.353967.
    Mm.371603.
    Mm.393918.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 54127.
    KEGGi mmu:54127.

    Organism-specific databases

    CTDi 6234.
    MGIi MGI:1859516. Rps28.

    Phylogenomic databases

    eggNOGi COG2053.
    GeneTreei ENSGT00390000003580.
    HOVERGENi HBG000219.
    InParanoidi Q059I1.
    KOi K02979.
    OMAi AIVMKVI.

    Miscellaneous databases

    NextBioi 310925.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q059I1.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    HAMAPi MF_00292. Ribosomal_S28e.
    InterProi IPR012340. NA-bd_OB-fold.
    IPR000289. Ribosomal_S28e.
    IPR028626. Ribosomal_S28e_CS.
    [Graphical view ]
    PANTHERi PTHR10769. PTHR10769. 1 hit.
    Pfami PF01200. Ribosomal_S28e. 1 hit.
    [Graphical view ]
    ProDomi PD005541. Ribosomal_S28e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00961. RIBOSOMAL_S28E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: BrainImported.
    3. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.

    Entry informationi

    Entry nameiQ059I1_MOUSE
    AccessioniPrimary (citable) accession number: Q059I1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)