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Q05940

- VMAT2_HUMAN

UniProt

Q05940 - VMAT2_HUMAN

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Protein
Synaptic vesicular amine transporter
Gene
SLC18A2, SVMT, VMAT2
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters. Pumps cytosolic monoamines including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. Requisite for vesicular amine storage prior to secretion via exocytosis.

GO - Molecular functioni

  1. amine transmembrane transporter activity Source: Ensembl
  2. drug binding Source: Ensembl
  3. monoamine transmembrane transporter activity Source: ProtInc
  4. serotonin transmembrane transporter activity Source: Ensembl

GO - Biological processi

  1. aging Source: Ensembl
  2. cellular response to ammonium ion Source: Ensembl
  3. cellular response to drug Source: Ensembl
  4. death Source: Ensembl
  5. endocytic recycling Source: Ensembl
  6. glucose homeostasis Source: Ensembl
  7. insulin secretion Source: Ensembl
  8. locomotory behavior Source: Ensembl
  9. monoamine transport Source: ProtInc
  10. negative regulation of neurotransmitter transport Source: Ensembl
  11. neurotransmitter secretion Source: Reactome
  12. post-embryonic development Source: Ensembl
  13. response to amphetamine Source: Ensembl
  14. response to cocaine Source: Ensembl
  15. response to corticosterone Source: Ensembl
  16. response to herbicide Source: Ensembl
  17. response to starvation Source: Ensembl
  18. response to zinc ion Source: Ensembl
  19. synaptic transmission Source: Reactome
  20. transmembrane transport Source: Reactome
Complete GO annotation...

Keywords - Biological processi

Neurotransmitter transport, Transport

Enzyme and pathway databases

ReactomeiREACT_15293. Dopamine Neurotransmitter Release Cycle.
REACT_15418. Norepinephrine Neurotransmitter Release Cycle.
REACT_15425. Serotonin Neurotransmitter Release Cycle.
REACT_20506. Na+/Cl- dependent neurotransmitter transporters.

Protein family/group databases

TCDBi2.A.1.2.29. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Synaptic vesicular amine transporter
Alternative name(s):
Monoamine transporter
Solute carrier family 18 member 2
Vesicular amine transporter 2
Short name:
VAT2
Gene namesi
Name:SLC18A2
Synonyms:SVMT, VMAT2
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 10

Organism-specific databases

HGNCiHGNC:10935. SLC18A2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 2020Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei21 – 4121Helical; Reviewed prediction
Add
BLAST
Topological domaini42 – 12988Lumenal, vesicle Reviewed prediction
Add
BLAST
Transmembranei130 – 15021Helical; Reviewed prediction
Add
BLAST
Topological domaini151 – 1599Cytoplasmic Reviewed prediction
Transmembranei160 – 18021Helical; Reviewed prediction
Add
BLAST
Topological domaini181 – 1899Lumenal, vesicle Reviewed prediction
Transmembranei190 – 21021Helical; Reviewed prediction
Add
BLAST
Topological domaini211 – 2199Cytoplasmic Reviewed prediction
Transmembranei220 – 24223Helical; Reviewed prediction
Add
BLAST
Topological domaini243 – 2486Lumenal, vesicle Reviewed prediction
Transmembranei249 – 27123Helical; Reviewed prediction
Add
BLAST
Topological domaini272 – 29120Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei292 – 31120Helical; Reviewed prediction
Add
BLAST
Topological domaini312 – 32817Lumenal, vesicle Reviewed prediction
Add
BLAST
Transmembranei329 – 35224Helical; Reviewed prediction
Add
BLAST
Topological domaini353 – 3575Cytoplasmic Reviewed prediction
Transmembranei358 – 37821Helical; Reviewed prediction
Add
BLAST
Topological domaini379 – 38911Lumenal, vesicle Reviewed prediction
Add
BLAST
Transmembranei390 – 41021Helical; Reviewed prediction
Add
BLAST
Topological domaini411 – 4144Cytoplasmic Reviewed prediction
Transmembranei415 – 43521Helical; Reviewed prediction
Add
BLAST
Topological domaini436 – 4405Lumenal, vesicle Reviewed prediction
Transmembranei441 – 46222Helical; Reviewed prediction
Add
BLAST
Topological domaini463 – 51452Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. clathrin-sculpted monoamine transport vesicle membrane Source: Reactome
  2. dense core granule Source: Ensembl
  3. integral component of plasma membrane Source: ProtInc
  4. membrane Source: ProtInc
  5. neuronal cell body Source: Ensembl
  6. plasma membrane Source: Reactome
  7. synaptic vesicle membrane Source: Ensembl
  8. terminal bouton Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasmic vesicle, Membrane

Pathology & Biotechi

Organism-specific databases

Orphaneti352649. Brain dopamine-serotonin vesicular transport disease.
PharmGKBiPA325.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 514514Synaptic vesicular amine transporter
PRO_0000127514Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi84 – 841N-linked (GlcNAc...) Reviewed prediction
Glycosylationi91 – 911N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi117 ↔ 3241 Publication
Modified residuei511 – 5111Phosphoserine By similarity
Modified residuei513 – 5131Phosphoserine By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiQ05940.
PRIDEiQ05940.

PTM databases

PhosphoSiteiQ05940.

Expressioni

Gene expression databases

BgeeiQ05940.
CleanExiHS_SLC18A2.
GenevestigatoriQ05940.

Organism-specific databases

HPAiHPA016856.

Interactioni

Subunit structurei

Interacts with SLC6A3 By similarity.

Protein-protein interaction databases

BioGridi112459. 2 interactions.
STRINGi9606.ENSP00000298472.

Structurei

3D structure databases

ProteinModelPortaliQ05940.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG255549.
HOGENOMiHOG000018545.
HOVERGENiHBG055082.
InParanoidiQ05940.
KOiK08155.
OMAiRIGYQIP.
OrthoDBiEOG79CXZ7.
PhylomeDBiQ05940.
TreeFamiTF313494.

Family and domain databases

InterProiIPR011701. MFS.
IPR020846. MFS_dom.
IPR016196. MFS_dom_general_subst_transpt.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 2 hits.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q05940-1 [UniParc]FASTAAdd to Basket

« Hide

MALSELALVR WLQESRRSRK LILFIVFLAL LLDNMLLTVV VPIIPSYLYS    50
IKHEKNATEI QTARPVHTAS ISDSFQSIFS YYDNSTMVTG NATRDLTLHQ 100
TATQHMVTNA SAVPSDCPSE DKDLLNENVQ VGLLFASKAT VQLITNPFIG 150
LLTNRIGYPI PIFAGFCIMF VSTIMFAFSS SYAFLLIARS LQGIGSSCSS 200
VAGMGMLASV YTDDEERGNV MGIALGGLAM GVLVGPPFGS VLYEFVGKTA 250
PFLVLAALVL LDGAIQLFVL QPSRVQPESQ KGTPLTTLLK DPYILIAAGS 300
ICFANMGIAM LEPALPIWMM ETMCSRKWQL GVAFLPASIS YLIGTNIFGI 350
LAHKMGRWLC ALLGMIIVGV SILCIPFAKN IYGLIAPNFG VGFAIGMVDS 400
SMMPIMGYLV DLRHVSVYGS VYAIADVAFC MGYAIGPSAG GAIAKAIGFP 450
WLMTIIGIID ILFAPLCFFL RSPPAKEEKM AILMDHNCPI KTKMYTQNNI 500
QSYPIGEDEE SESD 514
Length:514
Mass (Da):55,713
Last modified:October 1, 1996 - v2
Checksum:i42EA91A225485DB2
GO

Sequence cautioni

The sequence BAB19009.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti17 – 171R → H in CAA50489. 1 Publication
Sequence conflicti302 – 3021C → S in AAA59877. 1 Publication
Sequence conflicti354 – 3541K → T in AAA59877. 1 Publication
Sequence conflicti378 – 3781A → P in AAA59877. 1 Publication
Sequence conflicti395 – 3951I → N in AAA59877. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L09118 mRNA. Translation: AAA59877.1.
L23205 mRNA. Translation: AAA61290.1.
L14269 mRNA. Translation: AAA91853.1.
X71354 mRNA. Translation: CAA50489.1.
AB044401 Genomic DNA. Translation: BAB19009.1. Sequence problems.
AK314997 mRNA. Translation: BAG37493.1.
AL391988, AL731557 Genomic DNA. Translation: CAH70348.1.
AL731557, AL391988 Genomic DNA. Translation: CAI14828.1.
CH471066 Genomic DNA. Translation: EAW49428.1.
CH471066 Genomic DNA. Translation: EAW49429.1.
BC108927 mRNA. Translation: AAI08928.1.
BC108928 mRNA. Translation: AAI08929.1.
CCDSiCCDS7599.1.
PIRiA49368.
S29810.
RefSeqiNP_003045.2. NM_003054.4.
UniGeneiHs.596992.

Genome annotation databases

EnsembliENST00000298472; ENSP00000298472; ENSG00000165646.
GeneIDi6571.
KEGGihsa:6571.
UCSCiuc001ldd.2. human.

Polymorphism databases

DMDMi1722742.

Cross-referencesi

Web resourcesi

Wikipedia

Vesicular monoamine transporter entry

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L09118 mRNA. Translation: AAA59877.1 .
L23205 mRNA. Translation: AAA61290.1 .
L14269 mRNA. Translation: AAA91853.1 .
X71354 mRNA. Translation: CAA50489.1 .
AB044401 Genomic DNA. Translation: BAB19009.1 . Sequence problems.
AK314997 mRNA. Translation: BAG37493.1 .
AL391988 , AL731557 Genomic DNA. Translation: CAH70348.1 .
AL731557 , AL391988 Genomic DNA. Translation: CAI14828.1 .
CH471066 Genomic DNA. Translation: EAW49428.1 .
CH471066 Genomic DNA. Translation: EAW49429.1 .
BC108927 mRNA. Translation: AAI08928.1 .
BC108928 mRNA. Translation: AAI08929.1 .
CCDSi CCDS7599.1.
PIRi A49368.
S29810.
RefSeqi NP_003045.2. NM_003054.4.
UniGenei Hs.596992.

3D structure databases

ProteinModelPortali Q05940.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 112459. 2 interactions.
STRINGi 9606.ENSP00000298472.

Chemistry

BindingDBi Q05940.
ChEMBLi CHEMBL1893.
DrugBanki DB00386. Alseroxylon.
DB00206. Reserpine.
DB04844. Tetrabenazine.
GuidetoPHARMACOLOGYi 1012.

Protein family/group databases

TCDBi 2.A.1.2.29. the major facilitator superfamily (mfs).

PTM databases

PhosphoSitei Q05940.

Polymorphism databases

DMDMi 1722742.

Proteomic databases

PaxDbi Q05940.
PRIDEi Q05940.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000298472 ; ENSP00000298472 ; ENSG00000165646 .
GeneIDi 6571.
KEGGi hsa:6571.
UCSCi uc001ldd.2. human.

Organism-specific databases

CTDi 6571.
GeneCardsi GC10P119000.
H-InvDB HIX0035636.
HGNCi HGNC:10935. SLC18A2.
HPAi HPA016856.
MIMi 193001. gene.
neXtProti NX_Q05940.
Orphaneti 352649. Brain dopamine-serotonin vesicular transport disease.
PharmGKBi PA325.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG255549.
HOGENOMi HOG000018545.
HOVERGENi HBG055082.
InParanoidi Q05940.
KOi K08155.
OMAi RIGYQIP.
OrthoDBi EOG79CXZ7.
PhylomeDBi Q05940.
TreeFami TF313494.

Enzyme and pathway databases

Reactomei REACT_15293. Dopamine Neurotransmitter Release Cycle.
REACT_15418. Norepinephrine Neurotransmitter Release Cycle.
REACT_15425. Serotonin Neurotransmitter Release Cycle.
REACT_20506. Na+/Cl- dependent neurotransmitter transporters.

Miscellaneous databases

GeneWikii Vesicular_monoamine_transporter_2.
GenomeRNAii 6571.
NextBioi 25567.
PROi Q05940.
SOURCEi Search...

Gene expression databases

Bgeei Q05940.
CleanExi HS_SLC18A2.
Genevestigatori Q05940.

Family and domain databases

InterProi IPR011701. MFS.
IPR020846. MFS_dom.
IPR016196. MFS_dom_general_subst_transpt.
[Graphical view ]
Pfami PF07690. MFS_1. 1 hit.
[Graphical view ]
SUPFAMi SSF103473. SSF103473. 2 hits.
PROSITEi PS50850. MFS. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A human synaptic vesicle monoamine transporter cDNA predicts posttranslational modifications, reveals chromosome 10 gene localization and identifies TaqI RFLPs."
    Surratt C.K., Persico A.M., Yang X.D., Edgar S.R., Bird G.S., Hawkins A.L., Griffin C.A., Li X., Jabs E.W., Uhl G.R.
    FEBS Lett. 318:325-330(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "Functional identification and molecular cloning of a human brain vesicle monoamine transporter."
    Erickson J.D., Eiden L.E.
    J. Neurochem. 61:2314-2317(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  3. "Chromosomal localization of the human vesicular amine transporter genes."
    Peter D., Finn J.P., Klisak I., Liu Y., Kojis T., Heinzmann C., Roghani A., Sparkes R.S., Edwards R.H.
    Genomics 18:720-723(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Substantia nigra.
  4. "Extensive sequence divergence between the human and rat brain vesicular monoamine transporter: possible molecular basis for species differences in the susceptibility to MPP+."
    Lesch K.P., Gross J., Wolozin B.L., Murphy D.L., Riederer P.
    J. Neural Transm. 93:75-82(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Brain.
  5. "Exon/intron boundaries, novel polymorphisms, and association analysis with schizophrenia of the human synaptic vesicle monoamine transporter (SVMT) gene."
    Kunugi H., Ishida S., Akahane A., Nanko S.
    Mol. Psychiatry 6:456-460(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  6. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Uterus.
  7. "The DNA sequence and comparative analysis of human chromosome 10."
    Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
    , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
    Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  8. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  9. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  10. "Identification of human vesicle monoamine transporter (VMAT2) lumenal cysteines that form an intramolecular disulfide bond."
    Thiriot D.S., Sievert M.K., Ruoho A.E.
    Biochemistry 41:6346-6353(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: DISULFIDE BOND.
  11. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Platelet.

Entry informationi

Entry nameiVMAT2_HUMAN
AccessioniPrimary (citable) accession number: Q05940
Secondary accession number(s): B2RC96
, D3DRC4, Q15876, Q5VW49, Q9H3P6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1996
Last modified: September 3, 2014
This is version 136 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 10
    Human chromosome 10: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi