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Protein

Zinc finger protein STP3

Gene

STP3

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri169 – 19123C2H2-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  • metal ion binding Source: UniProtKB-KW
  • sequence-specific DNA binding Source: SGD
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciYEAST:G3O-32443-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein STP3
Gene namesi
Name:STP3
Ordered Locus Names:YLR375W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XII

Organism-specific databases

EuPathDBiFungiDB:YLR375W.
SGDiS000004367. STP3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 343343Zinc finger protein STP3PRO_0000270565Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei71 – 711PhosphoserineCombined sources
Modified residuei111 – 1111PhosphoserineCombined sources

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ05937.

PTM databases

iPTMnetiQ05937.

Interactioni

Protein-protein interaction databases

BioGridi31634. 26 interactions.
IntActiQ05937. 1 interaction.
MINTiMINT-2788188.

Structurei

3D structure databases

ProteinModelPortaliQ05937.
SMRiQ05937. Positions 157-200, 264-305, 310-335.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi36 – 11176Ser-richAdd
BLAST

Sequence similaritiesi

Contains 1 C2H2-type zinc finger.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri169 – 19123C2H2-typePROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Zinc-finger

Phylogenomic databases

GeneTreeiENSGT00390000007162.
HOGENOMiHOG000001139.
InParanoidiQ05937.
OMAiETSNCHQ.
OrthoDBiEOG092C590H.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 1 hit.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q05937-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNANNSAMN HITLPPISSF DNLIKAAERQ YNGEASSAST HPTLPNMNIS
60 70 80 90 100
NGSGSAGASS SMLSYQLLPH SNDVSRSNSS SSFLPSVQQP TEGSASASET
110 120 130 140 150
SSSASPSRSI SPILKVAGPS SVGGAGVSTP HSTKINKPRK KKQCPICRNF
160 170 180 190 200
YANLTTHKAT HLTPEDRPHK CPICHRGFAR NNDLLRHKKR HWKDEILSQS
210 220 230 240 250
GVLSNHNDGK GGSVSPNDDD THEKMTPMNS VTDYAQLKSL HQIKGTFKCP
260 270 280 290 300
FNSTLIQLDM DMYPYKLKPL NFETSNCHQT GVFSRCDTFK NHLKALHFEY
310 320 330 340
PPGTKKKDRN VVPGRCKHCG LKFENVDVWL NEHVGKQCGY KYH
Length:343
Mass (Da):37,718
Last modified:November 1, 1996 - v1
Checksum:iB68A9EF826D187D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19103 Genomic DNA. Translation: AAB67562.1.
BK006945 Genomic DNA. Translation: DAA09677.1.
PIRiS51392.
RefSeqiNP_013479.3. NM_001182264.3.

Genome annotation databases

EnsemblFungiiYLR375W; YLR375W; YLR375W.
GeneIDi851089.
KEGGisce:YLR375W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U19103 Genomic DNA. Translation: AAB67562.1.
BK006945 Genomic DNA. Translation: DAA09677.1.
PIRiS51392.
RefSeqiNP_013479.3. NM_001182264.3.

3D structure databases

ProteinModelPortaliQ05937.
SMRiQ05937. Positions 157-200, 264-305, 310-335.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi31634. 26 interactions.
IntActiQ05937. 1 interaction.
MINTiMINT-2788188.

PTM databases

iPTMnetiQ05937.

Proteomic databases

MaxQBiQ05937.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYLR375W; YLR375W; YLR375W.
GeneIDi851089.
KEGGisce:YLR375W.

Organism-specific databases

EuPathDBiFungiDB:YLR375W.
SGDiS000004367. STP3.

Phylogenomic databases

GeneTreeiENSGT00390000007162.
HOGENOMiHOG000001139.
InParanoidiQ05937.
OMAiETSNCHQ.
OrthoDBiEOG092C590H.

Enzyme and pathway databases

BioCyciYEAST:G3O-32443-MONOMER.

Miscellaneous databases

PROiQ05937.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 1 hit.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSTP3_YEAST
AccessioniPrimary (citable) accession number: Q05937
Secondary accession number(s): D6VZ11
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 129 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1240 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XII
    Yeast (Saccharomyces cerevisiae) chromosome XII: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.