Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q05815

- MCP_IIV6

UniProt

Q05815 - MCP_IIV6

Protein

Major capsid protein

Gene

MCP

Organism
Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 2 (23 Jan 2002)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Major capsid protein that self assembles to form an icosahedral capsid with a T=147 symmetry. Represents around 50% of the total virion protein mass.

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Major capsid protein
    Short name:
    MCP
    Alternative name(s):
    P50
    Gene namesi
    Name:MCP
    ORF Names:IIV-6 274L
    OrganismiInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
    Taxonomic identifieri176652 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
    Virus hostiAcheta domesticus (House cricket) [TaxID: 6997]
    Chilo suppressalis (striped riceborer) [TaxID: 168631]
    Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
    Gryllus campestris [TaxID: 58607]
    Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]
    ProteomesiUP000001359: Genome

    Subcellular locationi

    Virion Curated

    GO - Cellular componenti

    1. viral capsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 467467Major capsid proteinPRO_0000222381Add
    BLAST

    Expressioni

    Keywords - Developmental stagei

    Late protein

    Interactioni

    Subunit structurei

    Homotrimer.Curated

    Structurei

    3D structure databases

    ProteinModelPortaliQ05815.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the NCLDV major capsid protein family.Curated

    Family and domain databases

    Gene3Di2.70.9.10. 1 hit.
    2.70.9.20. 1 hit.
    InterProiIPR016114. ASFV_p72.
    IPR016111. Hexon_subdom4.
    IPR007542. Virus_major_coat_C.
    IPR016112. VP_dsDNA_II.
    [Graphical view]
    PfamiPF04451. Capsid_NCLDV. 1 hit.
    [Graphical view]
    SUPFAMiSSF49749. SSF49749. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q05815-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSISSSNVTS GFIDIATKDE IEKYMYGGKT STAYFVRETR KATWFTQVPV    50
    SLTRANGSAN FGSEWSASIS RAGDYLLYTW LRVRIPSVTL LSTNQFGANG 100
    RIRWCRNFMH NLIRECSITF NDLVAARFDH YHLDFWAAFT TPASKAVGYD 150
    NMIGNVSALI QPQPVPVAPA TVSLPEADLN LPLPFFFSRD SGVALPTAAL 200
    PYNEMRINFQ FHDWQRLLIL DNIAAVASQT VVPVVGATSD IATAPVLHHG 250
    TVWGNYAIVS NEERRRMGCS VRDILVEQVQ TAPRHVWNPT TNDAPNYDIR 300
    FSHAIKALFF AVRNTTFSNQ PSNYTTASPV ITSTTVILEP STGAFDPIHH 350
    TTLIYENTNR LNHMGSDYFS LVNPWYHAPT IPGLTGFHEY SYSLAFNEID 400
    PMGSTNYGKL TNISIVPTAS PAAKVGAAGT GPAGSGQNFP QTFEFIVTAL 450
    NNNIIRISGG ALGFPVL 467
    Length:467
    Mass (Da):51,322
    Last modified:January 23, 2002 - v2
    Checksum:i5A81E1E79D3B41A6
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti328 – 3281S → Y(PubMed:8492091)Curated
    Sequence conflicti331 – 3311I → L(PubMed:8492091)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAK82135.1.
    PIRiJQ2215.
    RefSeqiNP_149737.1. NC_003038.1.

    Genome annotation databases

    GeneIDi1733341.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAK82135.1 .
    PIRi JQ2215.
    RefSeqi NP_149737.1. NC_003038.1.

    3D structure databases

    ProteinModelPortali Q05815.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1733341.

    Family and domain databases

    Gene3Di 2.70.9.10. 1 hit.
    2.70.9.20. 1 hit.
    InterProi IPR016114. ASFV_p72.
    IPR016111. Hexon_subdom4.
    IPR007542. Virus_major_coat_C.
    IPR016112. VP_dsDNA_II.
    [Graphical view ]
    Pfami PF04451. Capsid_NCLDV. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49749. SSF49749. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Identification of the gene encoding the major capsid protein of insect iridescent virus type 6 by polymerase chain reaction."
      Stohwasser R., Raab K., Schnitzler P., Janssen W., Darai G.
      J. Gen. Virol. 74:873-879(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
      Jakob N.J., Mueller K., Bahr U., Darai G.
      Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
      Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
      Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
    4. Cited for: STRUCTURE BY CRYO-ELECTRON MICROSCOPY OF THE CAPSID.

    Entry informationi

    Entry nameiMCP_IIV6
    AccessioniPrimary (citable) accession number: Q05815
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1994
    Last sequence update: January 23, 2002
    Last modified: October 1, 2014
    This is version 69 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3