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Protein

RNA-binding suppressor of PAS kinase protein 1

Gene

RBS1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 892 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

GO - Biological processi

  • galactose metabolic process Source: SGD
  • RNA polymerase III assembly Source: SGD

Keywordsi

Molecular functionRNA-binding

Enzyme and pathway databases

BioCyciYEAST:G3O-29574-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-binding suppressor of PAS kinase protein 1
Gene namesi
Name:RBS1
Ordered Locus Names:YDL189W
ORF Names:D1266
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome IV

Organism-specific databases

EuPathDBiFungiDB:YDL189W
SGDiS000002348 RBS1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000762981 – 457RNA-binding suppressor of PAS kinase protein 1Add BLAST457

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei198PhosphoserineCombined sources1
Modified residuei435PhosphoserineCombined sources1
Modified residuei439PhosphoserineCombined sources1
Modified residuei447PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ05672
PaxDbiQ05672
PRIDEiQ05672

PTM databases

iPTMnetiQ05672

Interactioni

Protein-protein interaction databases

BioGridi31856, 66 interactors
DIPiDIP-2980N
IntActiQ05672, 12 interactors
MINTiQ05672
STRINGi4932.YDL189W

Structurei

3D structure databases

ProteinModelPortaliQ05672
SMRiQ05672
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 88R3HPROSITE-ProRule annotationAdd BLAST63

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi234 – 239Poly-Ser6

Phylogenomic databases

InParanoidiQ05672
OMAiQRKQEIF
OrthoDBiEOG092C4RWZ

Family and domain databases

Gene3Di3.30.1370.50, 1 hit
InterProiView protein in InterPro
IPR001374 R3H_dom
IPR036867 R3H_dom_sf
PfamiView protein in Pfam
PF01424 R3H, 1 hit
SMARTiView protein in SMART
SM00393 R3H, 1 hit
SUPFAMiSSF82708 SSF82708, 1 hit
PROSITEiView protein in PROSITE
PS51061 R3H, 1 hit

Sequencei

Sequence statusi: Complete.

Q05672-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTALDSRNWG LTPAMETGLF QKPQDRIFII ELENSIVSFI NSNTESFQLR
60 70 80 90 100
PMNSYYRLLS HQIAEYHNLN HVLARTQDSC VILFKGENFQ KIEGKPLLQE
110 120 130 140 150
LQLNKKPEEC ASSSESIEKS NNNRIFRILK RKEVGNECDY KIDGNTRTPN
160 170 180 190 200
SNLTANSNKD QKIEIDDKSS TDLEQERIEK ERLYEQRKQE IFDKLNKSED
210 220 230 240 250
DVKSTNSSGS SDSDNEWSDW LNGDDSNTQT SNGSVSSSSP FNSSVTTIQV
260 270 280 290 300
NKPQQQFYDS RRGRGGRRRG TNNYKDAYRG QSRRNKENGG YQSGYSSPYL
310 320 330 340 350
VYPPPQMGGN SLPTYPLMYN PAGPAPGPAP SPMVMGNNTV FMNPYMYNMN
360 370 380 390 400
PQGSCSFGTP IPMYPPYQYQ YQYQYNTQYH SGPYSNTPSY NSNNYTRSSA
410 420 430 440 450
NKYHHFQGKN SYSGAIPKRS DDSNSNKNEG IRRASVEGSP SSRDTDSVEM

KFDKLNI
Length:457
Mass (Da):51,957
Last modified:November 1, 1996 - v1
Checksum:iEDBF59E8F10B2001
GO

Sequence cautioni

The sequence CAA41660 differs from that shown. Reason: Frameshift at positions 294 and 322.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti1 – 3MTA → MRVSLSVSSFFHIQLDKFWR RQLSHIVPASRGDT in AAP04344 (PubMed:12844361).Curated3
Sequence conflicti43N → S in AAP04344 (PubMed:12844361).Curated1
Sequence conflicti81V → A in AAP04344 (PubMed:12844361).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X83276 Genomic DNA Translation: CAA58258.1
Z74237 Genomic DNA Translation: CAA98766.1
AY245794 mRNA Translation: AAP04344.1
X58857 Genomic DNA Translation: CAA41660.1 Frameshift.
BK006938 Genomic DNA Translation: DAA11674.1
PIRiS67744
RefSeqiNP_010092.2, NM_001180249.1

Genome annotation databases

EnsemblFungiiYDL189W; YDL189W; YDL189W
GeneIDi851338
KEGGisce:YDL189W

Similar proteinsi

Entry informationi

Entry nameiRBS1_YEAST
AccessioniPrimary (citable) accession number: Q05672
Secondary accession number(s): D6VRG4
, Q06896, Q07619, Q870H2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 7, 2006
Last sequence update: November 1, 1996
Last modified: April 25, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health