Q055D0 (RS8_LEPBL) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S8

Gene names

Name:	rpsH1
Ordered Locus Names:	LBL_0427
AND
Name:	rpsH
Ordered Locus Names:	LBL_0467

Organism

Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) [Complete proteome] [HAMAP]

Taxonomic identifier

355276 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Spirochaetes › Spirochaetia › Spirochaetales › Leptospiraceae › Leptospira › Leptospira borgpetersenii › Leptospira borgpetersenii serovar Hardjo-bovis

Protein attributes

Sequence length	133 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit By similarity. HAMAP-Rule MF_01302
Subunit structure	Part of the 30S ribosomal subunit. Contacts proteins S5 and S12 By similarity.
Sequence similarities	Belongs to the ribosomal protein S8P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 133	133	30S ribosomal protein S8 HAMAP-Rule MF_01302		PRO_0000290867

Sequences

	Sequence		Length	Mass (Da)
	Q055D0 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 9989DE4C8B8A42EA	FASTA	133	15,168
	10 20 30 40 50 60 MSMSDPIGDM LTRIRNAGRA KHDTCLVPGS KIKKSILDLM KEEGFIRDYE SVKVNETFED 70 80 90 100 110 120 YKVFLKYDQT KRPIIRELIR VSTPGRRVYI KSTEIRPYKN NIGTLIVSTS KGIMTGKNAR 130 KLKLGGEVIL KMS

References

[1]

"Genome reduction in Leptospira borgpetersenii reflects limited transmission potential." Bulach D.M., Zuerner R.L., Wilson P., Seemann T., McGrath A., Cullen P.A., Davis J., Johnson M., Kuczek E., Alt D.P., Peterson-Burch B., Coppel R.L., Rood J.I., Davies J.K., Adler B. Proc. Natl. Acad. Sci. U.S.A. 103:14560-14565(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: L550.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000348 Genomic DNA. Translation: ABJ78025.1. CP000348 Genomic DNA. Translation: ABJ78065.1.
RefSeq	YP_796958.1. NC_008508.1. YP_796998.1. NC_008508.1.
3D structure databases
ProteinModelPortal	Q055D0.
ModBase	Search...
Protein-protein interaction databases
STRING	355276.LBL_0467.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABJ78025; ABJ78025; LBL_0427. ABJ78065; ABJ78065; LBL_0467.
GeneID	4408859. 4408919.
KEGG	lbl:LBL_0427. lbl:LBL_0467.
PATRIC	22364100. VBILepBor75619_0526.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0096.
HOGENOM	HOG000204095.
KO	K02994.
OMA	QRVSKPG.
ProtClustDB	PRK00136.
Enzyme and pathway databases
BioCyc	LBOR355276:GHUQ-726-MONOMER. LBOR355276:GHUQ-766-MONOMER.
Family and domain databases
HAMAP	MF_01302_B. Ribosomal_S8_B.
InterPro	IPR000630. Ribosomal_S8. [Graphical view]
PANTHER	PTHR11758. PTHR11758. 1 hit.
Pfam	PF00410. Ribosomal_S8. 1 hit. [Graphical view]
SUPFAM	SSF56047. Ribosomal_S8. 1 hit.
PROSITE	PS00053. RIBOSOMAL_S8. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS8_LEPBL

Accession

Primary (citable) accession number: Q055D0

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 12, 2007
Last sequence update:	November 14, 2006
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program