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Q04RU6

- UVRC_LEPBJ

UniProt

Q04RU6 - UVRC_LEPBJ

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Protein

UvrABC system protein C

Gene

uvrC

Organism
Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.UniRule annotation

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-HAMAP
  2. excinuclease ABC activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. nucleotide-excision repair Source: UniProtKB-HAMAP
  2. SOS response Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Excision nuclease

Keywords - Biological processi

DNA damage, DNA excision, DNA repair, SOS response

Enzyme and pathway databases

BioCyciLBOR355277:GHYM-1829-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UvrABC system protein CUniRule annotation
Short name:
Protein UvrCUniRule annotation
Alternative name(s):
Excinuclease ABC subunit CUniRule annotation
Gene namesi
Name:uvrCUniRule annotation
Ordered Locus Names:LBJ_1853
OrganismiLeptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Taxonomic identifieri355277 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesLeptospiraceaeLeptospira
ProteomesiUP000000656: Chromosome 1

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
  2. excinuclease repair complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 609609UvrABC system protein CPRO_1000077803Add
BLAST

Interactioni

Subunit structurei

Interacts with UvrB in an incision complex.UniRule annotation

Protein-protein interaction databases

STRINGi355277.LBJ_1853.

Structurei

3D structure databases

ProteinModelPortaliQ04RU6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini19 – 9779GIY-YIGUniRule annotationAdd
BLAST
Domaini208 – 24336UVRUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the UvrC family.UniRule annotation
Contains 1 GIY-YIG domain.UniRule annotation
Contains 1 UVR domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0322.
HOGENOMiHOG000279960.
KOiK03703.
OMAiYLVITNE.
OrthoDBiEOG6K13R9.

Family and domain databases

Gene3Di3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
HAMAPiMF_00203. UvrC.
InterProiIPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR010994. RuvA_2-like.
IPR001943. UVR_dom.
IPR004791. UvrC.
IPR001162. UvrC_homol_region.
[Graphical view]
PfamiPF01541. GIY-YIG. 1 hit.
PF02151. UVR. 1 hit.
PF08459. UvrC_HhH_N. 1 hit.
[Graphical view]
SMARTiSM00465. GIYc. 1 hit.
SM00278. HhH1. 2 hits.
[Graphical view]
SUPFAMiSSF46600. SSF46600. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00194. uvrC. 1 hit.
PROSITEiPS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
PS50165. UVRC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q04RU6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPEILNHILI LEKIKNLGIS PGCYLWKSRK GEVLYIGKAK NLDKRVRNYL
60 70 80 90 100
KENHPDIKTR ALQKEIFDLD WIATGTEKEA LILEATLIKK HNPRFNVRFK
110 120 130 140 150
DDKKYPYICV SLSESFPMVY ITRKLKDNGD RYFGPYSDVK STRETLDIIL
160 170 180 190 200
RIFPVRKTRQ VLPLPKPRRP CLNFDMGRCL GPCQGNIPVE DYKIVIDQVI
210 220 230 240 250
QFLEGKKESL VGDLSIKMSA SSNRMDFEKA ARYRDMLQRI QNFREKQTVV
260 270 280 290 300
SAEGGDEDVI GFARKKDEGQ VILLEVRGGR LETKKSFPIQ GVLDAEDSEI
310 320 330 340 350
LGAFFRDYYL NAALVPPLIF VPADIQEETA AVMDVLQEKT GFRPKLKSPR
360 370 380 390 400
GGDKRSLLKI AEKNAELGLT ERLLATHYRD QTASLKEIQE MFSLEHPPHI
410 420 430 440 450
IECYDISHFQ GSEPVASGVM FVEGKPFKQG YRKYNIRGYK GINDPGMIHE
460 470 480 490 500
VISRRLQRIA NEESVFPDLI VIDGGPTQLA KACEAAMEAG AERIPMIGLA
510 520 530 540 550
KKREEIYFPG DNEPFIFDMN SSGMKLLRHL RDEAHRFGVS HHRSRRNKET
560 570 580 590 600
MRSLIQNVPD IGLKRSKLLL RHFSGEKKIE DATKEELLAV PGIGENLAEK

ILKRIRKKE
Length:609
Mass (Da):69,680
Last modified:November 14, 2006 - v1
Checksum:iA7F6FE524049C19A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000350 Genomic DNA. Translation: ABJ76374.1.
RefSeqiYP_801132.1. NC_008510.1.

Genome annotation databases

EnsemblBacteriaiABJ76374; ABJ76374; LBJ_1853.
GeneIDi4409998.
KEGGilbj:LBJ_1853.
PATRICi22359348. VBILepBor13265_2381.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000350 Genomic DNA. Translation: ABJ76374.1 .
RefSeqi YP_801132.1. NC_008510.1.

3D structure databases

ProteinModelPortali Q04RU6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 355277.LBJ_1853.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ76374 ; ABJ76374 ; LBJ_1853 .
GeneIDi 4409998.
KEGGi lbj:LBJ_1853.
PATRICi 22359348. VBILepBor13265_2381.

Phylogenomic databases

eggNOGi COG0322.
HOGENOMi HOG000279960.
KOi K03703.
OMAi YLVITNE.
OrthoDBi EOG6K13R9.

Enzyme and pathway databases

BioCyci LBOR355277:GHYM-1829-MONOMER.

Family and domain databases

Gene3Di 3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
HAMAPi MF_00203. UvrC.
InterProi IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR010994. RuvA_2-like.
IPR001943. UVR_dom.
IPR004791. UvrC.
IPR001162. UvrC_homol_region.
[Graphical view ]
Pfami PF01541. GIY-YIG. 1 hit.
PF02151. UVR. 1 hit.
PF08459. UvrC_HhH_N. 1 hit.
[Graphical view ]
SMARTi SM00465. GIYc. 1 hit.
SM00278. HhH1. 2 hits.
[Graphical view ]
SUPFAMi SSF46600. SSF46600. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsi TIGR00194. uvrC. 1 hit.
PROSITEi PS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
PS50165. UVRC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JB197.

Entry informationi

Entry nameiUVRC_LEPBJ
AccessioniPrimary (citable) accession number: Q04RU6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: November 14, 2006
Last modified: October 29, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3