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Q04MW8

- Q04MW8_STRP2

UniProt

Q04MW8 - Q04MW8_STRP2

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Protein
Submitted name:

Amino acid ABC transporter, periplasmic amino acid-binding protein, putative

Gene

SPD_0109

Organism
Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei237 – 2371Chloride 1; via amide nitrogenImported

GO - Molecular functioni

  1. transporter activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSPNE373153:GIX6-109-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Amino acid ABC transporter, periplasmic amino acid-binding protein, putativeImported
Gene namesi
Ordered Locus Names:SPD_0109Imported
OrganismiStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)Imported
Taxonomic identifieri373153 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000001452: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi373153.SPD_0109.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4I62X-ray1.05A1-268[»]
ProteinModelPortaliQ04MW8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni177 – 1815Chloride 2 bindingImported

Phylogenomic databases

eggNOGiCOG0834.
HOGENOMiHOG000031895.
KOiK02030.
OMAiHRIRQID.
OrthoDBiEOG6JQH58.

Family and domain databases

InterProiIPR001638. SBP_bac_3.
[Graphical view]
PfamiPF00497. SBP_bac_3. 1 hit.
[Graphical view]
SMARTiSM00062. PBPb. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q04MW8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNKMKKVLMT MFGLVMLPLL FACSNNQSAG IEAIKSKGKL VVALNPDFAP
60 70 80 90 100
FEYQKVVDGK NQIVGSDIEL AKAIATELGV ELELSPMSFD NVLASVQSGK
110 120 130 140 150
ADLAISGVSK TDERSKVFDF STPYYTAKNK LIVKKSDLAT YQSVNDLAQK
160 170 180 190 200
KVGAQKGSIQ ETMAKDLLQN SSLVSLPKNG NLITDLKSGQ VDAVIFEEPV
210 220 230 240 250
AKGFVENNPD LAIADLNFEK EQDDSYAVAM KKDSKELKEA VDKTIQKLKE
260
SGELDKLIED AFKASIEK
Length:268
Mass (Da):29,209
Last modified:November 14, 2006 - v1
Checksum:iCCFCDAF5D7BBF5D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000410 Genomic DNA. Translation: ABJ54473.1.
RefSeqiYP_815607.1. NC_008533.1.

Genome annotation databases

EnsemblBacteriaiABJ54473; ABJ54473; SPD_0109.
GeneIDi4441134.
KEGGispd:SPD_0109.
PATRICi19681168. VBIStrPne27904_0120.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000410 Genomic DNA. Translation: ABJ54473.1 .
RefSeqi YP_815607.1. NC_008533.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4I62 X-ray 1.05 A 1-268 [» ]
ProteinModelPortali Q04MW8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 373153.SPD_0109.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ54473 ; ABJ54473 ; SPD_0109 .
GeneIDi 4441134.
KEGGi spd:SPD_0109.
PATRICi 19681168. VBIStrPne27904_0120.

Phylogenomic databases

eggNOGi COG0834.
HOGENOMi HOG000031895.
KOi K02030.
OMAi HRIRQID.
OrthoDBi EOG6JQH58.

Enzyme and pathway databases

BioCyci SPNE373153:GIX6-109-MONOMER.

Family and domain databases

InterProi IPR001638. SBP_bac_3.
[Graphical view ]
Pfami PF00497. SBP_bac_3. 1 hit.
[Graphical view ]
SMARTi SM00062. PBPb. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
    Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
    J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D39 / NCTC 7466Imported.
  2. "1.05 Angstrom crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine."
    Center for Structural Genomics of Infectious Diseases (CSGID)
    Stogios P.J., Kudritska M., Wawrzak Z., Minasov G., Yim V., Savchenko A., Anderson W.F.
    Submitted (NOV-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.05 ANGSTROMS).

Entry informationi

Entry nameiQ04MW8_STRP2
AccessioniPrimary (citable) accession number: Q04MW8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: October 29, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteomeImported

External Data

Dasty 3