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Q04MW8

- Q04MW8_STRP2

UniProt

Q04MW8 - Q04MW8_STRP2

Protein
Submitted name:

Amino acid ABC transporter, periplasmic amino acid-binding protein, putative

Gene

SPD_0109

Organism
Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (14 Nov 2006)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei237 – 2371Chloride 1; via amide nitrogenImported

    GO - Molecular functioni

    1. transporter activity Source: InterPro

    Enzyme and pathway databases

    BioCyciSPNE373153:GIX6-109-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Amino acid ABC transporter, periplasmic amino acid-binding protein, putativeImported
    Gene namesi
    Ordered Locus Names:SPD_0109Imported
    OrganismiStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)Imported
    Taxonomic identifieri373153 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
    ProteomesiUP000001452: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi373153.SPD_0109.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4I62X-ray1.05A1-268[»]
    ProteinModelPortaliQ04MW8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni177 – 1815Chloride 2 bindingImported

    Phylogenomic databases

    eggNOGiCOG0834.
    HOGENOMiHOG000031895.
    KOiK02030.
    OMAiHRIRQID.
    OrthoDBiEOG6JQH58.

    Family and domain databases

    InterProiIPR001638. SBP_bac_3.
    [Graphical view]
    PfamiPF00497. SBP_bac_3. 1 hit.
    [Graphical view]
    SMARTiSM00062. PBPb. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q04MW8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNKMKKVLMT MFGLVMLPLL FACSNNQSAG IEAIKSKGKL VVALNPDFAP    50
    FEYQKVVDGK NQIVGSDIEL AKAIATELGV ELELSPMSFD NVLASVQSGK 100
    ADLAISGVSK TDERSKVFDF STPYYTAKNK LIVKKSDLAT YQSVNDLAQK 150
    KVGAQKGSIQ ETMAKDLLQN SSLVSLPKNG NLITDLKSGQ VDAVIFEEPV 200
    AKGFVENNPD LAIADLNFEK EQDDSYAVAM KKDSKELKEA VDKTIQKLKE 250
    SGELDKLIED AFKASIEK 268
    Length:268
    Mass (Da):29,209
    Last modified:November 14, 2006 - v1
    Checksum:iCCFCDAF5D7BBF5D0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000410 Genomic DNA. Translation: ABJ54473.1.
    RefSeqiYP_815607.1. NC_008533.1.

    Genome annotation databases

    EnsemblBacteriaiABJ54473; ABJ54473; SPD_0109.
    GeneIDi4441134.
    KEGGispd:SPD_0109.
    PATRICi19681168. VBIStrPne27904_0120.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000410 Genomic DNA. Translation: ABJ54473.1 .
    RefSeqi YP_815607.1. NC_008533.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4I62 X-ray 1.05 A 1-268 [» ]
    ProteinModelPortali Q04MW8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 373153.SPD_0109.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ54473 ; ABJ54473 ; SPD_0109 .
    GeneIDi 4441134.
    KEGGi spd:SPD_0109.
    PATRICi 19681168. VBIStrPne27904_0120.

    Phylogenomic databases

    eggNOGi COG0834.
    HOGENOMi HOG000031895.
    KOi K02030.
    OMAi HRIRQID.
    OrthoDBi EOG6JQH58.

    Enzyme and pathway databases

    BioCyci SPNE373153:GIX6-109-MONOMER.

    Family and domain databases

    InterProi IPR001638. SBP_bac_3.
    [Graphical view ]
    Pfami PF00497. SBP_bac_3. 1 hit.
    [Graphical view ]
    SMARTi SM00062. PBPb. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
      Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
      J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: D39 / NCTC 7466Imported.
    2. "1.05 Angstrom crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine."
      Center for Structural Genomics of Infectious Diseases (CSGID)
      Stogios P.J., Kudritska M., Wawrzak Z., Minasov G., Yim V., Savchenko A., Anderson W.F.
      Submitted (NOV-2012) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (1.05 ANGSTROMS).

    Entry informationi

    Entry nameiQ04MW8_STRP2
    AccessioniPrimary (citable) accession number: Q04MW8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3