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Q04MW8 (Q04MW8_STRP2) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SPD_0109 EMBL ABJ54473.1
OrganismStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP] EMBL ABJ54473.1
Taxonomic identifier373153 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   LigandChloride PDB 4I62
   Technical term3D-structure PDB 4I62
Complete proteome
Gene Ontology (GO)
   Molecular_functiontransporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region177 – 1815Chloride 2 binding PDB 4I62

Sites

Binding site2371Chloride 1; via amide nitrogen PDB 4I62

Sequences

Sequence LengthMass (Da)Tools
Q04MW8 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: CCFCDAF5D7BBF5D0

FASTA26829,209
        10         20         30         40         50         60 
MNKMKKVLMT MFGLVMLPLL FACSNNQSAG IEAIKSKGKL VVALNPDFAP FEYQKVVDGK 

        70         80         90        100        110        120 
NQIVGSDIEL AKAIATELGV ELELSPMSFD NVLASVQSGK ADLAISGVSK TDERSKVFDF 

       130        140        150        160        170        180 
STPYYTAKNK LIVKKSDLAT YQSVNDLAQK KVGAQKGSIQ ETMAKDLLQN SSLVSLPKNG 

       190        200        210        220        230        240 
NLITDLKSGQ VDAVIFEEPV AKGFVENNPD LAIADLNFEK EQDDSYAVAM KKDSKELKEA 

       250        260 
VDKTIQKLKE SGELDKLIED AFKASIEK 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
Lanie J.A., Ng W.L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D39 / NCTC 7466.
[2]"1.05 Angstrom crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine."
Center for Structural Genomics of Infectious Diseases (CSGID)
Stogios P.J., Kudritska M., Wawrzak Z., Minasov G., Yim V., Savchenko A., Anderson W.F.
Submitted (NOV-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.05 ANGSTROMS) IN COMPLEX WITH CHLORIDE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000410 Genomic DNA. Translation: ABJ54473.1.
RefSeqYP_815607.1. NC_008533.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4I62X-ray1.05A1-268[»]
ProteinModelPortalQ04MW8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING373153.SPD_0109.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABJ54473; ABJ54473; SPD_0109.
GeneID4441134.
KEGGspd:SPD_0109.
PATRIC19681168. VBIStrPne27904_0120.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0834.
HOGENOMHOG000031895.
KOK02030.
OMAKPYYDNS.
OrthoDBEOG6JQH58.
ProtClustDBCLSK803677.

Enzyme and pathway databases

BioCycSPNE373153:GIX6-109-MONOMER.

Family and domain databases

InterProIPR001638. SBP_bac_3.
[Graphical view]
PfamPF00497. SBP_bac_3. 1 hit.
[Graphical view]
SMARTSM00062. PBPb. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ04MW8_STRP2
AccessionPrimary (citable) accession number: Q04MW8
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: December 11, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)