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Q04MI0 (Q04MI0_STRP2) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SPD_0250 EMBL ABJ53695.1
OrganismStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP] EMBL ABJ53695.1
Taxonomic identifier373153 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length1256 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Secretedcell wall; Peptidoglycan-anchor By similarity SAAS SAAS019931.

Sequences

Sequence LengthMass (Da)Tools
Q04MI0 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 62CC8A2D4F3C49AA

FASTA1,256140,279
        10         20         30         40         50         60 
MRKTPSHTEK KMVYSIRSLK NGTGSVLIGA SLVLLAMATP TISSDESTPT TNEPNNRNTT 

        70         80         90        100        110        120 
TLAQPLTDTA ADSGKNESDI SSPRNANASL EKTEEKPATE PTTSTSPVTT ETKAEEPIED 

       130        140        150        160        170        180 
NYFRIHVKKL PEENKDAQGL WTWDDVEKPS ENWPNGALSF KDAKKDDYGY YLDVKLKGEQ 

       190        200        210        220        230        240 
AKKISFLINN TAGKNLTGDK SVEKLVPKMN EAWLDQDYKV FSYEPQPAGT VRVNYYRTDG 

       250        260        270        280        290        300 
NYDKKSLWYW GDVKNPSSAQ WPDGTDFTAT GKYGRYIDIP LNEAAREFGF LLLDESKQGD 

       310        320        330        340        350        360 
DVKIRKENYK FTDLKNHSQI FLKDDDESIY TNPYYVHDIR MTGAQHVGTS SIESSFSTLV 

       370        380        390        400        410        420 
GAKKEDILKH SNITNHLGNK VTITDVAIDE AGKKVTYSGD FSDTKHPYTV SYNSDQFTTK 

       430        440        450        460        470        480 
TSWHLKDETY SYDGKLGADL KEEGKQVDLT LWSPSADKVS VVVYDKNDPD KVVGTVALEK 

       490        500        510        520        530        540 
GERGTWKQTL DSTNKLGITD FTGYYYQYQI ERQGKTVLAL DPYAKSLAAW NSDDAKIDDA 

       550        560        570        580        590        600 
HKVAKAAFVD PAKLGPQDLT YGKIHNFKTR EDAVIYEAHV RDFTSDPAIA KDLTKPFGTF 

       610        620        630        640        650        660 
EAFIEKLDYL KDLGVTHIQL LPVLSYYFVN ELKNHERLSD YASSNSNYNW GYDPQNYFSL 

       670        680        690        700        710        720 
TGMYSSDPKN PEKRIAEFKN LINEIHKRGM GAILDVVYNH TAKVDIFEDL EPNYYHFMDA 

       730        740        750        760        770        780 
DGTPRTSFGG GRLGTTHHMT KRLLVDSIKY LVDTYKVDGF RFDMMGDHDA ASIEEAYKAA 

       790        800        810        820        830        840 
RALNPNLIML GEGWRTYAGD ENMPTKAADQ DWMKHTDTVA VFSDDIRNNL KSGYPNEGQP 

       850        860        870        880        890        900 
AFITGGKRDV NTIFKNLIAQ PTNFEADSPG DVIQYIAAHD NLTLFDIIAQ SIKKDPSKAE 

       910        920        930        940        950        960 
NYAEIHRRLR LGNLMVLTAQ GTPFIHSGQE YGRTKQFRDP AYKTPVAEDK VPNKSHLLRD 

       970        980        990       1000       1010       1020 
KDGNPFDYPY FIHDSYDSSD AVNKFDWTKA TDGKAYPENV KSRDYMKGLI ALRQSTDAFR 

      1030       1040       1050       1060       1070       1080 
LKSLQDIKDR VHLITVPGQN GVEKEDVVIG YQITAPNGDI YAVFVNADEK AREFNLGTAF 

      1090       1100       1110       1120       1130       1140 
AHLRNAEVLA DENQAGSVGI ANPKGLEWTE KGLKLNALTA TVLRVSQNGT SHESTAEEKP 

      1150       1160       1170       1180       1190       1200 
DSTPSKPEHQ DPAPEARPDS TKPDAKVADA ENKPSQATAD SQAEQPAQEA QASSVKEAVQ 

      1210       1220       1230       1240       1250 
NESVENSSKK NIPATPDRQA ELPNTGIKNE NKLLFAGISL LALLGLGFLL KNKKEN 

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References

[1]"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
Lanie J.A., Ng W.L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D39 / NCTC 7466.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000410 Genomic DNA. Translation: ABJ53695.1.
RefSeqYP_815768.1. NC_008533.1.

3D structure databases

ProteinModelPortalQ04MI0.
SMRQ04MI0. Positions 120-338.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING373153.SPD_0250.

Protein family/group databases

CAZyCBM41. Carbohydrate-Binding Module Family 41.
CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABJ53695; ABJ53695; SPD_0250.
GeneID4442469.
KEGGspd:SPD_0250.
PATRIC19681488. VBIStrPne27904_0282.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1523.
HOGENOMHOG000235589.
KOK01176.
OMAFKAQGAV.
OrthoDBEOG66TG1T.
ProtClustDBCLSK803694.

Enzyme and pathway databases

BioCycSPNE373153:GIX6-250-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013784. Carb-bd-like_fold.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR005877. Gpos_YSIRK.
IPR019948. Gram-positive_anchor.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR019931. LPXTG_anchor.
IPR005323. PUD.
IPR011838. Pullulan_Gpos.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 2 hits.
PF02922. CBM_48. 1 hit.
PF00746. Gram_pos_anchor. 1 hit.
PF03714. PUD. 2 hits.
PF04650. YSIRK_signal. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 2 hits.
SSF81296. SSF81296. 1 hit.
TIGRFAMsTIGR01167. LPXTG_anchor. 1 hit.
TIGR02102. pullulan_Gpos. 1 hit.
TIGR01168. YSIRK_signal. 1 hit.
PROSITEPS50847. GRAM_POS_ANCHORING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ04MI0_STRP2
AccessionPrimary (citable) accession number: Q04MI0
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: December 11, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)