Q04ME3 (Q04ME3_STRP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Hyaluronate lyase EMBL ABJ54273.1
EC=4.2.2.1 EMBL ABJ54273.1

Gene names

Ordered Locus Names:

SPD_0287

Organism

Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP] EMBL ABJ54273.1

Taxonomic identifier

373153 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Streptococcaceae › Streptococcus

Protein attributes

Sequence length	1067 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABJ54273.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hyaluronate lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q04ME3 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 41E6B9C3A57F4515	FASTA	1,067	120,730
	10 20 30 40 50 60 MQTKTKKLIV SLSSLVLSGF LLNHYMTVGA EETTTNTIQQ SQKEVQYQQR DTKNLVENGD 70 80 90 100 110 120 FGQTEDGSSP WTGSKAQGWS AWVDQKNSSA DASTRVIEAK DGAITISSPE KLRAAVHRMV 130 140 150 160 170 180 PIEAKKKYKL RFKIKTDNKV GIAKVRIIEE SGKDKRLWNS ATTSGTKDWQ TIEADYSPTL 190 200 210 220 230 240 DVDKIKLELF YETGTGTVSF KDIELVEVAD QPSEDSQTDK QLEEKIDLPI GKKHVFSLAD 250 260 270 280 290 300 YTYKVENPDV ASVKNGILEP LKEGTTNVIV SKDGKEVKKI PLKILASVKD TYTDRLDDWN 310 320 330 340 350 360 GIIAGNQYYD SKNEQMAKLN QELEGKVADS LSSISSQADR IYLWEKFSNY KTSANLTATY 370 380 390 400 410 420 RKLEEMAKQV TNPSSRYYQD ETVVRTVRDS MEWMHKHVYN SEKSIVGNWW DYEIGTPRAI 430 440 450 460 470 480 NNTLSLMKEY FSDEEIKKYT DVIEKFVPDP EHFRKTTDNP FKALGGNLVD MGRVKVIAGL 490 500 510 520 530 540 LRKDDQEISS TIRSIEQVFK LVDQGEGFYQ DGSYIDHTNV AYTGAYGNVL IDGLSQLLPV 550 560 570 580 590 600 IQKTKNPIDK DKMQTMYHWI DKSFAPLLVN GELMDMSRGR SISRANSEGH VAAVEVLRGI 610 620 630 640 650 660 HRIADMSEGE TKQRLQSLVK TIVQSDSYYD VFKNLKTYKD ISLMQSLLSD AGVASVPRTS 670 680 690 700 710 720 YLSAFNKMDK TAMYNAEKGF GFGLSLFSSR TLNYEHMNKE NKRGWYTSDG MFYLYNGDLS 730 740 750 760 770 780 HYSDGYWPTV NPYKMPGTTE TDAKRADSDT GKVLPSAFVG TSKLDDANAT ATMDFTNWNQ 790 800 810 820 830 840 TLTAHKSWFM LKDKIAFLGS NIQNTSTDTA ATTIDQRKLE SSNPYKVYVN DKEASLTEQE 850 860 870 880 890 900 KDYPETQSVF LESSDSKKNI GYFFFKKSSI SMSKALQKGA WKDINEGQSD KEVENEFLTI 910 920 930 940 950 960 SQAHKQNGDS YGYMLIPNVD RATFNQMIKE LESSLIENNE TLQSVYDAKQ GVWGIVKYDD 970 980 990 1000 1010 1020 SVSTISNQFQ VLKRGVYTIR KEGDEYKIAY YNPETQESAP DQEVFKKLEQ AAQPQVQNSK 1030 1040 1050 1060 EKEKSEEEKN HSDQKNLPQT GEGQSILASL GFLLLGAFYL FRRGKNN

References

[1]

"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6." Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E. J. Bacteriol. 189:38-51(2007) [PubMed: 17041037] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000410 Genomic DNA. Translation: ABJ54273.1.
RefSeq	YP_815805.1. NC_008533.1.
3D structure databases
ProteinModelPortal	Q04ME3.
SMR	Q04ME3. Positions 213-1009.
ModBase	Search...
Protein-protein interaction databases
STRING	Q04ME3.
Protein family/group databases
CAZy	PL8. Polysaccharide Lyase Family 8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTRT00000020478; EBSTRP00000019718; EBSTRG00000020478.
GeneID	4442428.
GenomeReviews	Gene locus SPD_0287 in contig CP000410_GR.
KEGG	spd:SPD_0287.
PATRIC	19681570. VBIStrPne27904_0323.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG04835.
GeneTree	EBGT00050000027679.
HOGENOM	HBG698564.
OMA	GSYIDHT.
ProtClustDB	CLSK559792.
Family and domain databases
InterPro	IPR008929. Chondroitin_lyas. IPR008979. Galactose-bd-like. IPR011013. Glyco_hydro-type_carb-bd. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR023295. Hyaluronate_lyase_beta_dom. IPR014756. Ig_E-set. IPR019931. LPXTG-motif_cell_wall_anchor. IPR011071. Lyase_8-like_C. IPR012970. Lyase_8_alpha_N. IPR004103. Lyase_8_C. IPR003159. Lyase_8_central_dom. IPR012329. Lyase_8_N. [Graphical view]
Gene3D	G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit. G3DSA:2.60.40.1380. Hyaluronate_lyase_beta_dom. 1 hit. G3DSA:2.60.220.10. Lyase_8_C. 1 hit. G3DSA:1.50.10.100. Lyase_8_N. 1 hit.
KO	K01727.
Pfam	PF02278. Lyase_8. 1 hit. PF02884. Lyase_8_C. 1 hit. PF08124. Lyase_8_N. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit. SSF81296. Ig_E-set. 1 hit. SSF49863. Lyase_like_C. 1 hit.
TIGRFAMs	TIGR01167. LPXTG_anchor. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q04ME3_STRP2

Accession

Primary (citable) accession number: Q04ME3

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)