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Q04LZ6 (Q04LZ6_STRP2) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SPD_0444
OrganismStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP] EMBL ABJ55223.1
Taxonomic identifier373153 [NCBI]
Taxonomic lineageBacteriaFirmicutesLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length1635 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentSecreted SAAS SAAS019931
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpathogenesis

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell surface

Inferred from electronic annotation. Source: InterPro

cell wall

Inferred from electronic annotation. Source: UniProtKB-KW

cytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionmannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q04LZ6 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 42EC32F21F248E29

FASTA1,635180,264
        10         20         30         40         50         60 
MIGAVLFAGP ALAEETAVPE NSGANTELVS GESEHSTNEA DKQNEGEHAR ENKLEKAEGV 

        70         80         90        100        110        120 
ATASETASPA SNEAATTETA EAASAAKPEE KASEVVAETP SAEAKPKSDK ETEAKPEATN 

       130        140        150        160        170        180 
QGDESKPAAE ANKTEKEVQP DVPKNTEKTL KPKEIKFNSW EELLKWEPGA REDDAINRGS 

       190        200        210        220        230        240 
VVLASRRTGH LVNEKASKEA KVQALSNTNS KAKDHASVGG EEFKAYAFDY WQYLDSMVFW 

       250        260        270        280        290        300 
EGLVPTPDVI DAGHRNGVPV YGTLFFNWSN SIADQERFAE ALKQDADGSF PIARKLVDMA 

       310        320        330        340        350        360 
KYYGYDGYFI NQETTGDLVK PLGEKMRQFM LYSKEYAAKV NHPIKYSWYD AMTYNYGRYH 

       370        380        390        400        410        420 
QDGLGEYNYQ FMQPEGDKVP ADNFFANFNW DKAKNDYTIA TANWIGRNPY DVFAGLELQQ 

       430        440        450        460        470        480 
GGSYKTKVKW NDILDENGKL RLSLGLFAPD TITSLGKTGE DYHKNEDIFF TGYQGDPTGQ 

       490        500        510        520        530        540 
KPGDKDWYGI ANLVADRTPA VGNTFTTSFN TGHGKKWFVD GKVSKDSEWN YRSVSGVLPT 

       550        560        570        580        590        600 
WRWWQTSTGE KLRAEYDFTD AYNGGNSLKF SGDVAGKTDQ DVRLYSTKLE VTEKTKLRVA 

       610        620        630        640        650        660 
HKGGKGSKVY MAFSTTPDYK FDDADAWKEL TLSDNWTNEE FDLSSLAGKT IYAVKLFFEH 

       670        680        690        700        710        720 
EGAVKDYQFN LGQLTISDNH QEPQSPTSFS VVKQSLKNAQ EAEAVVQFKG NKDADFYEVY 

       730        740        750        760        770        780 
EKDGDSWKLL TGSSSTTIYL PKVSRSASAQ GTTQELKVVA VGKNGVRSEA ATTTFDWGMT 

       790        800        810        820        830        840 
VKDTSLPKPL AENIVPGATV IDSTFPKTEG GEGIEGMLNG TITSLSDKWS SAQLSGSVDI 

       850        860        870        880        890        900 
RLTKSRTVVR WVMDHAGAGG ESVNDGLMNT KDFDLYYKDA DGEWKLAKEV RGNKAHVTDI 

       910        920        930        940        950        960 
TLDKPITAQD WRLNVVTSDN GTPWKAIRIY NWKMYEKLDT ESVNIPMAKA AARSLGNNKV 

       970        980        990       1000       1010       1020 
QVGFADVPAG ATITVYDNPN SQTPLATLKS EVGGDLASAP LDLTNQSGLL YYRTQLPGKE 

      1030       1040       1050       1060       1070       1080 
ISNVLAVSVP KDDRRIKSVS LETGPKKTSY AEGEDLDLRG GVLRVQYEGG TEDELIRLTH 

      1090       1100       1110       1120       1130       1140 
AGVSVSGFDT HHKGEQNLTL QYLGQPVNAN LSVTVTGQDE ASPKTILGIE VSQEPKKDYL 

      1150       1160       1170       1180       1190       1200 
VGDSLDLSEG RFAVAYSNDT MEEHSFTDEG VEISGYDAQK TGRQTLTLRY QGHEVNFDVL 

      1210       1220       1230       1240       1250       1260 
VSPKAALNDE YLKQKLAEVE AAKNKVVYNF ASPEVKEAFL KAIEAAEQVL KDHETSTQDQ 

      1270       1280       1290       1300       1310       1320 
VNDRLNKLTE AHKALNGQEK FTEEKTELDR LTGEAQELLA AKPNHPSGSA LAPLLEKNKA 

      1330       1340       1350       1360       1370       1380 
LVEKVDLSPE ELATAKQSLK DLVALLKEDK SAVFSDSKTG VEVHFSNKEK TVIKGLKVER 

      1390       1400       1410       1420       1430       1440 
VQASAEEKKY FAGEDAHVFE IEGLDEKGQD VDLSYASIVK IPIEKDKKVK KVFFLPEGKG 

      1450       1460       1470       1480       1490       1500 
AVELAFEQTD SHVIFTAPHF THYAFVYESA EKPQPAKPAP QNKVLPKPTY QPASDQQKAP 

      1510       1520       1530       1540       1550       1560 
KLEVQEEKVA FHRQEHENTE MLVGEQRVII QGRDGLLRHV FEVDEKGQRR LRSTEVIQEA 

      1570       1580       1590       1600       1610       1620 
IPEIVEIGTK VKTVPAVVAT QEKPAQNTAV KSEEASKQLP NTGTADANEA LIAGLASLGL 

      1630 
ASLALTLRRK REDKD 

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References

[1]"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
J. Bacteriol. 189:38-51(2007) [PubMed: 17041037] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000410 Genomic DNA. Translation: ABJ55223.1.
RefSeqYP_815952.1. NC_008533.1.

3D structure databases

ProteinModelPortalQ04LZ6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ04LZ6.

Protein family/group databases

CAZyCBM32. Carbohydrate-Binding Module Family 32.
GH85. Glycoside Hydrolase Family 85.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBSTRT00000019872; EBSTRP00000019112; EBSTRG00000019872.
GeneID4442040.
GenomeReviewsGene locus SPD_0444 in contig CP000410_GR.
KEGGspd:SPD_0444.
PATRIC19681910. VBIStrPne27904_0494.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4724.
GeneTreeEBGT00050000026619.
HOGENOMHBG702174.
OMAIRIYNWK.
ProtClustDBCLSK883954.

Family and domain databases

InterProIPR011080. Big_3.
IPR011490. Extracell_matric-bd_Ebh.
IPR011098. G5.
IPR005201. Glyco_hydro_85.
IPR019948. Gram-positive_anchor.
IPR009063. Ig/albumin-bd.
IPR019931. LPXTG-motif_cell_wall_anchor.
IPR001899. Surface_protein_Gram_pos_cocci.
[Graphical view]
PfamPF07523. Big_3. 2 hits.
PF07554. FIVAR. 1 hit.
PF07501. G5. 1 hit.
PF03644. Glyco_hydro_85. 1 hit.
PF00746. Gram_pos_anchor. 1 hit.
[Graphical view]
SUPFAMSSF46997. Bac_Ig/alb_bind. 1 hit.
TIGRFAMsTIGR01167. LPXTG_anchor. 1 hit.
PROSITEPS51109. G5. 1 hit.
PS50847. GRAM_POS_ANCHORING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ04LZ6_STRP2
AccessionPrimary (citable) accession number: Q04LZ6
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)