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Q04LN6 (Q04LN6_STRP2) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:bgaA EMBL ABJ53768.1
Ordered Locus Names:SPD_0562 EMBL ABJ53768.1
OrganismStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP] EMBL ABJ53768.1
Taxonomic identifier373153 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length2228 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Secretedcell wall; Peptidoglycan-anchor By similarity SAAS SAAS019948.

Sequences

Sequence LengthMass (Da)Tools
Q04LN6 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 5E3323A89F8E561C

FASTA2,228246,782
        10         20         30         40         50         60 
MGKGHWNRKR VYSIRKFAVG ACSVMIGTCA VLLGGNIAGE SVVYADETLI THTAEKPKEE 

        70         80         90        100        110        120 
KMIVEEKADK ALETKNVVER TEQSEPSSTE AIASEKKEDE AVTPKEEKVS AKPEEKAPRI 

       130        140        150        160        170        180 
ESQASSQEKP LKEDAKAVTN EEVNQMIENR KVDFNQNWYF KLNANSKEAI KPDADVSTWK 

       190        200        210        220        230        240 
KLDLPYDWSI FNDFDHESPA QNEGGQLNGG EAWYRKTFKL DEKDLKKNVR LTFDGVYMDS 

       250        260        270        280        290        300 
QVYVNGQLVG HYPNGYNQFS YDITKYLYKD GRENVIAVHA VNKQPSSRWY SGSGIYRDVT 

       310        320        330        340        350        360 
LQVTDKVHVE KNGTTILTPK LEEQQHGKVE THVTSKIVNT DDKDHELVAE YQIVERGGHA 

       370        380        390        400        410        420 
VTGLVRTASR TLKAHESTSL DAILEVERPK LWTVLNDKPA LYELITRVYR DGQLVDAKKD 

       430        440        450        460        470        480 
LFGYRYYHWT PNEGFSLNGE RIKFHGVSLH HDHGALGAEE NYKAEYRRLK QMKEMGVNSI 

       490        500        510        520        530        540 
RTTHNPASEQ TLQIAAELGL LVQEEAFDTW YGGKKPYDYG RFFEKDATHP EARKGEKWSD 

       550        560        570        580        590        600 
FDLRTMVERG KNNPAIFMWS IGNEIGEANG DAHSLATVKR LVKVIKDVDK TRYVTMGADK 

       610        620        630        640        650        660 
FRFGNGSGGH EKIADELDAV GFNYSEDNYK ALRAKHPKWL IYGSETSSAT RTRGSYYRPE 

       670        680        690        700        710        720 
RELKHSNGPE RNYEQSDYGN DRVGWGKTAT ASWTFDRDNA GYAGQFIWTG TDYIGEPTPW 

       730        740        750        760        770        780 
HNQNQTPVKS SYFGIVDTAG IPKHDFYLYQ SQWVSVKKKP MVHLLPHWNW ENKELASKVA 

       790        800        810        820        830        840 
DSEGKIPVRA YSNASSVELF LNGKSLGLKT FNKKQTSDGR TYQEGANANE LYLEWKVAYQ 

       850        860        870        880        890        900 
PGTLEAIARD ESGKEIARDK ITTAGKPAAV RLIKEDHAIA ADGKDLTYIY YEIVDSQGNV 

       910        920        930        940        950        960 
VPTANNLVRF QLHGQGQLVG VDNGEQASRE RYKAQADGSW IRKAFNGKGV AIVKSTEQAG 

       970        980        990       1000       1010       1020 
KFTLTAHSDL LKSNQVTVFT GKKEGQEKTV LGTEVPKVQT IIGEAPEMPT TVPFVYSDGS 

      1030       1040       1050       1060       1070       1080 
RAERPVTWSL VDVSKPGIVT VKGMADGREV EARVEVIALK SELPVVKRIA PNTNLNSVDK 

      1090       1100       1110       1120       1130       1140 
SVSYVLTDGS VQEYEVDKWE IAEEDKAKLA IPGSRIQATG YLEGQPIHAT LVVEEGNPAA 

      1150       1160       1170       1180       1190       1200 
PVVPTVTVGG EAVTGLTSRQ PMQYRTLSYG AQLPEVTASA ENADVTVLQA SAANGMRASI 

      1210       1220       1230       1240       1250       1260 
FIQPKDGGPL QTYAIQFLEE APKIAHLSLQ VEKADSLKED QTVKLSVRAH YQDGTQAVLP 

      1270       1280       1290       1300       1310       1320 
ADKVTFSTSG EGEVAIRKGM LELHKPGAVT LNAEYEGAKG QVELTIQANT EKKIAQSIRP 

      1330       1340       1350       1360       1370       1380 
VNVVTDLHQE PSLPATVTVE YDKGFPKTHK VTWQAIPKEK LDSYQIFEVL GKVEGIDLEA 

      1390       1400       1410       1420       1430       1440 
RAKVSVEGIV SVEEVSVTTP IAEAPQLPES VRTYDSNGHV SSAKVAWDAI RPEQYAKEGV 

      1450       1460       1470       1480       1490       1500 
FTVNGRLEGT QLTTKLHVRV SAQTEQGANI SDQWTGSELP LAFASDSNPS DPVSNVNDKL 

      1510       1520       1530       1540       1550       1560 
ISYNNQPANR WTNWNRSNPE ASVGVLFGDS GILSKRSVDN LSVGFHEDHG VGAPKSYVIE 

      1570       1580       1590       1600       1610       1620 
YYVGKTVPTA PKNPSFVGNE DHVFNDSANW KPVTNLKAPA QLKAGEMNHF SFDKVETYAI 

      1630       1640       1650       1660       1670       1680 
RIRMVKADNK RGTSITEVQI FAKQVAAAKQ GQTRIQVDGK DLANFNPDLT DYYLESVDGK 

      1690       1700       1710       1720       1730       1740 
VPAVTANVSN NGLATVVPSV REGEPVRVIA KAENGDILGE YRLHFTKDKN LLSHKPVAAV 

      1750       1760       1770       1780       1790       1800 
KQARLLQVGQ ALELPTKVPV YFTGKDGYET KDLTVEWEEV PAENLTKAGQ FTVRGRVLGS 

      1810       1820       1830       1840       1850       1860 
NLVAEVTVRV TDKLGETLSD NPNYDENSNQ AFASATNDID KNSHDRVDYL NDGDHSENRR 

      1870       1880       1890       1900       1910       1920 
WTNWSPTPSS NPEVSAGVIF RENGKIVERT VAQAKLHFFA DSGTDAPSKL VLERYVGPGF 

      1930       1940       1950       1960       1970       1980 
EVPTYYSNYQ AYESGHPFNN PENWEAVPYR ADKDIAAGDE INVTFKAVKA KVMRWRMERK 

      1990       2000       2010       2020       2030       2040 
ADKSGVAMIE MTFLAPSELP QESTQSKILV DGKELADFAE NRQDYQITYK GQRPKVSVEE 

      2050       2060       2070       2080       2090       2100 
NNQVASTVVD SGEDSLPVLV RLVSESGKQV KEYRIQLTKE KPVSAVQEDL PKLEFVEKDL 

      2110       2120       2130       2140       2150       2160 
AYKTVEKKDS TLYLGETRVE QEGKVGKERI FTVINPDGSK EEKLREVVEV PTDRIVLVGT 

      2170       2180       2190       2200       2210       2220 
KPVAQEAKKP QVSEKADTKP IDSSEADQTN KAQLPNTGSA ASQAAVAAGL ALLGLSAGLV 


VTKGKKED 

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References

[1]"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
Lanie J.A., Ng W.L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D39 / NCTC 7466.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000410 Genomic DNA. Translation: ABJ53768.1.
RefSeqYP_816062.1. NC_008533.1.

3D structure databases

ProteinModelPortalQ04LN6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING373153.SPD_0562.

Protein family/group databases

CAZyGH2. Glycoside Hydrolase Family 2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABJ53768; ABJ53768; SPD_0562.
GeneID4442642.
KEGGspd:SPD_0562.
PATRIC19682194. VBIStrPne27904_0637.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3250.
HOGENOMHOG000285085.
KOK01190.
OMAMQYRTLA.
OrthoDBEOG680WZ9.
ProtClustDBCLSK883971.

Enzyme and pathway databases

BioCycSPNE373153:GIX6-562-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 1 hit.
InterProIPR011081. Big_4.
IPR011098. G5_dom.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR005877. Gpos_YSIRK.
IPR019948. Gram-positive_anchor.
IPR019931. LPXTG_anchor.
[Graphical view]
PfamPF07532. Big_4. 4 hits.
PF07501. G5. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
PF00746. Gram_pos_anchor. 1 hit.
PF04650. YSIRK_signal. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SUPFAMSSF49303. SSF49303. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
TIGRFAMsTIGR01167. LPXTG_anchor. 1 hit.
TIGR01168. YSIRK_signal. 1 hit.
PROSITEPS51109. G5. 1 hit.
PS50847. GRAM_POS_ANCHORING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ04LN6_STRP2
AccessionPrimary (citable) accession number: Q04LN6
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: November 13, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)