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Q04JW6

- Q04JW6_STRP2

UniProt

Q04JW6 - Q04JW6_STRP2

Protein
Submitted name:

Alpha-amylase

Gene

amy

Organism
Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (14 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciSPNE373153:GIX6-1215-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported (EC:3.2.1.1Imported)
    Gene namesi
    Name:amyImported
    Ordered Locus Names:SPD_1215Imported
    OrganismiStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)Imported
    Taxonomic identifieri373153 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
    ProteomesiUP000001452: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi373153.SPD_1215.

    Structurei

    3D structure databases

    ProteinModelPortaliQ04JW6.
    SMRiQ04JW6. Positions 2-480.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiRATKYGD.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q04JW6-1 [UniParc]FASTAAdd to Basket

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    MQNQTLMQYF EWYLPHDGQH WTRLAENAPH LAHLGISHVW MPPAFKATNE    50
    KDVGYGVYDL FDLGEFNQKG TVRTKYGFKE DYLQAIQALK AQGIQPMADV 100
    VLNHKAAADH REAFQVIEVD PVDRTVELGE PFTINGWTSF TFDGRQDTYN 150
    GFHWHWYHFT GTDYDAKRSK SGIYLIQGDN KGWANEELVD NENGNYDYLM 200
    YADLDFKHPE VIQNIYDWAD WFMETTGVAG FRLDAVKHID SFFMRNFIRD 250
    MKEKYGDDFY VFGEFWNSDK EANLDYLEKT EEHFDLVDVR LHQNLFEASQ 300
    AGANYDLRGI FTDSLVELKP DKAVTFVDNH DTQRGQALES TVEEWFKPAA 350
    YALILLRQDG LPCVFYGDYY GISGQYAQQD FKEILDRLLA IRKDLAYGEQ 400
    NDYFDHANCI GWVRSGAENQ SPIAVLISND QENSKSMFVG QEWTNQTFVD 450
    LLGSHQGQVT IDEEGYGQFP VSARSVSVWA VNTI 484
    Length:484
    Mass (Da):55,880
    Last modified:November 14, 2006 - v1
    Checksum:iDA511868187A0FFC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000410 Genomic DNA. Translation: ABJ54813.1.
    RefSeqiYP_816682.1. NC_008533.1.

    Genome annotation databases

    EnsemblBacteriaiABJ54813; ABJ54813; SPD_1215.
    GeneIDi4443068.
    KEGGispd:SPD_1215.
    PATRICi19683638. VBIStrPne27904_1352.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000410 Genomic DNA. Translation: ABJ54813.1 .
    RefSeqi YP_816682.1. NC_008533.1.

    3D structure databases

    ProteinModelPortali Q04JW6.
    SMRi Q04JW6. Positions 2-480.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 373153.SPD_1215.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ54813 ; ABJ54813 ; SPD_1215 .
    GeneIDi 4443068.
    KEGGi spd:SPD_1215.
    PATRICi 19683638. VBIStrPne27904_1352.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi RATKYGD.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci SPNE373153:GIX6-1215-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
      Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
      J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: D39 / NCTC 7466Imported.

    Entry informationi

    Entry nameiQ04JW6_STRP2
    AccessioniPrimary (citable) accession number: Q04JW6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3