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Q04JW6

- Q04JW6_STRP2

UniProt

Q04JW6 - Q04JW6_STRP2

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Protein
Submitted name:

Alpha-amylase

Gene
amy, SPD_1215
Organism
Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSPNE373153:GIX6-1215-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyImported
Ordered Locus Names:SPD_1215Imported
OrganismiStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)Imported
Taxonomic identifieri373153 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000001452: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi373153.SPD_1215.

Structurei

3D structure databases

ProteinModelPortaliQ04JW6.
SMRiQ04JW6. Positions 2-480.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiRATKYGD.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q04JW6-1 [UniParc]FASTAAdd to Basket

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MQNQTLMQYF EWYLPHDGQH WTRLAENAPH LAHLGISHVW MPPAFKATNE    50
KDVGYGVYDL FDLGEFNQKG TVRTKYGFKE DYLQAIQALK AQGIQPMADV 100
VLNHKAAADH REAFQVIEVD PVDRTVELGE PFTINGWTSF TFDGRQDTYN 150
GFHWHWYHFT GTDYDAKRSK SGIYLIQGDN KGWANEELVD NENGNYDYLM 200
YADLDFKHPE VIQNIYDWAD WFMETTGVAG FRLDAVKHID SFFMRNFIRD 250
MKEKYGDDFY VFGEFWNSDK EANLDYLEKT EEHFDLVDVR LHQNLFEASQ 300
AGANYDLRGI FTDSLVELKP DKAVTFVDNH DTQRGQALES TVEEWFKPAA 350
YALILLRQDG LPCVFYGDYY GISGQYAQQD FKEILDRLLA IRKDLAYGEQ 400
NDYFDHANCI GWVRSGAENQ SPIAVLISND QENSKSMFVG QEWTNQTFVD 450
LLGSHQGQVT IDEEGYGQFP VSARSVSVWA VNTI 484
Length:484
Mass (Da):55,880
Last modified:November 14, 2006 - v1
Checksum:iDA511868187A0FFC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000410 Genomic DNA. Translation: ABJ54813.1.
RefSeqiYP_816682.1. NC_008533.1.

Genome annotation databases

EnsemblBacteriaiABJ54813; ABJ54813; SPD_1215.
GeneIDi4443068.
KEGGispd:SPD_1215.
PATRICi19683638. VBIStrPne27904_1352.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000410 Genomic DNA. Translation: ABJ54813.1 .
RefSeqi YP_816682.1. NC_008533.1.

3D structure databases

ProteinModelPortali Q04JW6.
SMRi Q04JW6. Positions 2-480.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 373153.SPD_1215.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ54813 ; ABJ54813 ; SPD_1215 .
GeneIDi 4443068.
KEGGi spd:SPD_1215.
PATRICi 19683638. VBIStrPne27904_1352.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000094847.
KOi K01176.
OMAi RATKYGD.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci SPNE373153:GIX6-1215-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
    Lanie J.A., Ng W.L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
    J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D39 / NCTC 7466.

Entry informationi

Entry nameiQ04JW6_STRP2
AccessioniPrimary (citable) accession number: Q04JW6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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