Q04JI4 (WHIA_STRP2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative sporulation transcription regulator WhiA

Gene names

Name:	whiA
Ordered Locus Names:	SPD_1394

Organism

Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP]

Taxonomic identifier

373153 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus › Streptococcus pneumoniae

Protein attributes

Sequence length	303 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May be required for sporulation By similarity.
Sequence similarities	Belongs to the WhiA transcriptional regulatory family.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of sporulation Inferred from electronic annotation. Source: HAMAP regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 303	303	Putative sporulation transcription regulator WhiA HAMAP-Rule MF_01420		PRO_0000376581
Regions
	DNA binding	272 – 303	32	H-T-H motif Potential

Sequences

	Sequence		Length	Mass (Da)
	Q04JI4 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: AF33FFE6D2578400	FASTA	303	34,092
	10 20 30 40 50 60 MSFTVAVKEE ILGQHHLSWH ELSAIIKMSG SIGLSTSGLT LSVVTENAKL ARHLYESFLH 70 80 90 100 110 120 FYEIKSEIRH HQRSNLRKNR VYTVFTDEKV QDLLSDLHLA DSFFGLETGI DEAILSDEEA 130 140 150 160 170 180 GRAYLCGAFL ANGSIRDPES GKYQLEISSV YLDHAQGIAS LLQQFLLDAK VLERKKGAVT 190 200 210 220 230 240 YLQRAEDIMD FLIVIGAMQA RDDFERVKIL RETRNDLNRA NNAETANIAR TVSASMKTIN 250 260 270 280 290 300 NISKIKDIMG LENLPVDLQE VAQLRIQHPD YSIQQLADSL STPLTKSGVN HRLRKINKIA DEL

References

[1]

"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6." Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E. J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: D39 / NCTC 7466.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000410 Genomic DNA. Translation: ABJ53810.1.
RefSeq	YP_816854.1. NC_008533.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	373153.SPD_1394.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABJ53810; ABJ53810; SPD_1394.
GeneID	4442995.
KEGG	spd:SPD_1394.
PATRIC	19684020. VBIStrPne27904_1543.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1481.
HOGENOM	HOG000040187.
KO	K09762.
OMA	DSFFGIE.
ProtClustDB	CLSK877081.
Family and domain databases
HAMAP	MF_01420. HTH-type_WhiA.
InterPro	IPR003802. Sporulation_regulator_WhiA. IPR023054. Sporulation_regulator_WhiA_C. IPR018478. Sporulation_regulator_WhiA_N. [Graphical view]
Pfam	PF02650. HTH_WhiA. 1 hit. PF10298. WhiA_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR00647. MG103. 1 hit.
ProtoNet	Search...

Entry information

Entry name

WHIA_STRP2

Accession

Primary (citable) accession number: Q04JI4

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 26, 2009
Last sequence update:	November 14, 2006
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program