Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q04JI4 (WHIA_STRP2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative sporulation transcription regulator WhiA
Gene names
Name:whiA
Ordered Locus Names:SPD_1394
OrganismStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP]
Taxonomic identifier373153 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length303 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be required for sporulation By similarity. HAMAP-Rule MF_01420

Sequence similarities

Belongs to the WhiA transcriptional regulatory family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 303303Putative sporulation transcription regulator WhiA HAMAP-Rule MF_01420
PRO_0000376581

Regions

DNA binding272 – 30332H-T-H motif Potential

Sequences

Sequence LengthMass (Da)Tools
Q04JI4 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: AF33FFE6D2578400

FASTA30334,092
        10         20         30         40         50         60 
MSFTVAVKEE ILGQHHLSWH ELSAIIKMSG SIGLSTSGLT LSVVTENAKL ARHLYESFLH 

        70         80         90        100        110        120 
FYEIKSEIRH HQRSNLRKNR VYTVFTDEKV QDLLSDLHLA DSFFGLETGI DEAILSDEEA 

       130        140        150        160        170        180 
GRAYLCGAFL ANGSIRDPES GKYQLEISSV YLDHAQGIAS LLQQFLLDAK VLERKKGAVT 

       190        200        210        220        230        240 
YLQRAEDIMD FLIVIGAMQA RDDFERVKIL RETRNDLNRA NNAETANIAR TVSASMKTIN 

       250        260        270        280        290        300 
NISKIKDIMG LENLPVDLQE VAQLRIQHPD YSIQQLADSL STPLTKSGVN HRLRKINKIA 


DEL 

« Hide

References

[1]"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: D39 / NCTC 7466.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000410 Genomic DNA. Translation: ABJ53810.1.
RefSeqYP_816854.1. NC_008533.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING373153.SPD_1394.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABJ53810; ABJ53810; SPD_1394.
GeneID4442995.
KEGGspd:SPD_1394.
PATRIC19684020. VBIStrPne27904_1543.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1481.
HOGENOMHOG000040187.
KOK09762.
OMAHKFMLDA.
OrthoDBEOG68WR87.

Enzyme and pathway databases

BioCycSPNE373153:GIX6-1394-MONOMER.

Family and domain databases

Gene3D3.10.28.10. 1 hit.
HAMAPMF_01420. HTH_type_WhiA.
InterProIPR027434. Homing_endonucl.
IPR003802. Sporulation_regulator_WhiA.
IPR023054. Sporulation_regulator_WhiA_C.
IPR018478. Sporulation_regulator_WhiA_N.
[Graphical view]
PfamPF02650. HTH_WhiA. 1 hit.
PF10298. WhiA_N. 1 hit.
[Graphical view]
SUPFAMSSF55608. SSF55608. 1 hit.
TIGRFAMsTIGR00647. MG103. 1 hit.
ProtoNetSearch...

Entry information

Entry nameWHIA_STRP2
AccessionPrimary (citable) accession number: Q04JI4
Entry history
Integrated into UniProtKB/Swiss-Prot: May 26, 2009
Last sequence update: November 14, 2006
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families